Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0016 |
Symbol | |
ID | 8533129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 18315 |
End bp | 18794 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646382395 |
Product | type IV pilus modification protein PilV |
Protein accession | YP_003261929 |
Protein GI | 261854646 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAACCTG TCAATAAACC TGTTTACGGC CCCAGCCAGC GTGGCGTGGG CTTAATTGAA GTGCTCATCG CCGTGCTGGT GCTGTCCATC GGCTTTTTAG GTATTGCGGC CCTGCAAGCC AAGTCGTTGT CTACCAACAA CAGCGCCATG GCGCGCAGCA TGGCGGTGGT GGCGAGCTAT TCGATTCTCG ATGCCATGCG GGCGGATCGA ACCAATGCCT TGACCGGTAA TTACAACCAA ACGGTAACGG CTAACGCCTG CACCGGCAAC GGCTCACTGG CGCAAACCCA ACTCAACACT TGGTGTAACG AACTGGCGCA AAACCTCGGC GCGCAAGCGG CCACCACCGG CACGGTCGAT TGCAAAAATA CAGGCGATTG CACCGTCACC GTCACTTTCG ATGAAAGCCG TGTGGGCACT AACACCGGCG GTACCAGCGG CACCGGCGTT ACCACCATCA CCACGAGGGC GATGTTATGA
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Protein sequence | MEPVNKPVYG PSQRGVGLIE VLIAVLVLSI GFLGIAALQA KSLSTNNSAM ARSMAVVASY SILDAMRADR TNALTGNYNQ TVTANACTGN GSLAQTQLNT WCNELAQNLG AQAATTGTVD CKNTGDCTVT VTFDESRVGT NTGGTSGTGV TTITTRAML
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