| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0009 |
|---|
| Symbol | |
|---|
| ID | 8533122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 12156 |
|---|
| End bp | 12857 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646382388 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003261922 |
|---|
| Protein GI | 261854639 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGAGG ATACTGCCTT GATTCTGCGG GCGCTGCGGG TTTCTAAAAC CGTCACAGCG
CCCGGGAACG AACCTTTGAC CATTCTGCGT GATGCGAGTT TAACAGTTGC CGAGGGTGAG
GCTGTGGCGT TAATGGGTGC ATCGGGGGCG GGCAAGTCTA CCTTGCTGGC TTTGCTGGCA
GGTTTGGATA CGCCGACGAG CGGTGAGGTT GAGTTGGCCG GTTTTTCTCT GAACAACTTA
AATGAGGACG AGCGCGCCGC CGTCCGTGCG GGCCGGGTGG GATTTGTTTT TCAGTCATTT
CAGTTGATTG ATGGCTTGAC GGCTCTGGAA AATGTGGCTT TGCCGCTGGA ATTGCAGGGC
ACAGCGAACA GTACGGCGCA GGCCAAAGCG GCGTTAGATG AGGTGGGTTT GAGCCACCGT
CTGCACCATC TGCCCAAGGT GCTTTCAGGC GGTGAACAAC AGCGGGTTGC CCTGGCGCGG
GCATTTGCCG GAACGCCCGC CATTTTGTTT GCCGATGAGC CAACCGGCTC GCTCGACACT
GCCACAGGCG AGCGCATCAT TGATTTGCTG TTCGCGCTGC GCGATCAGCA TCAAACCGCG
TTGGTACTGG TAACGCACGA TCCGGCCTTG GCTGCCCGAT GTAATCGTGG CTATCGCTTA
CAGGGTGGCT TGCAGGGTGG AGAATTAACC CCATGGCAAT AG
|
|---|
| Protein sequence | MPEDTALILR ALRVSKTVTA PGNEPLTILR DASLTVAEGE AVALMGASGA GKSTLLALLA
GLDTPTSGEV ELAGFSLNNL NEDERAAVRA GRVGFVFQSF QLIDGLTALE NVALPLELQG
TANSTAQAKA ALDEVGLSHR LHHLPKVLSG GEQQRVALAR AFAGTPAILF ADEPTGSLDT
ATGERIIDLL FALRDQHQTA LVLVTHDPAL AARCNRGYRL QGGLQGGELT PWQ
|
|---|
| |