Gene Hneap_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0007 
Symbol 
ID8533120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp8681 
End bp9454 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content51% 
IMG OID646382386 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_003261920 
Protein GI261854637 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.645227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG CGACCTGGAA TGTCAATTCG CTTAATGTAC GCAAACCGCA GGTGCTCTCT 
TGGCTGGCGC AGCAGCAACC TGCCATTTTG GGTTTGCAGG AATTAAAACA AGTCAATGAA
GCCATTGATA ACAGCGACTT TGCAGCAATG GGCTACCAAA CGCTACTTAA CGGCCAGAAA
ACCTATAACG GTGTCGCGCT GATCTATCAA GAGGAGTTAG GCGAACCTTC GGATGTGGTT
TGCGACATAC CGGCACTGGA CGACCCGCAA CGGCGCGTCA TTGCCGCCAC ATTTGGGGAA
TTGCGGGTAA TCAATGCCTA TGTCGTCAAT GGTGAAGCGA TCGATTCTGA AAAATACCAG
TACAAACTCA ATTGGCTGGA GGCCTTTTCT AACTGGCTGG CTTTAGAAAT CGCTCAGCAT
CCAAATCTCG TGGTGATGGG TGATTTCAAT ATCGCGCCAA GCGATGCCGA CGTGTTTGAC
CCCGAGCGGT TCAAAGATGC CGTGCTATGC AGCCCGCCCG AGCGTGATTA TTTCAACCGA
TTGTTGGCAA TGGGTTTTAC CGATGCGCTC AATTGCTTTT CAAATGAAGA AAATAATTTT
ACCTGGTGGG ACTACCGTGG CGGCGGTTAC CGCAGAAACC ACGGCTTGCG TATCGACCAC
ATCTTAACAA GCCCGGCCGT TCAGGCAAAA GCCACTGCCT GCCATGTCGA TAAAGAACCT
AGAGGCTGGG AGCGACCCTC CGACCATGCA CCTGTGGTAC TCACGCTGGC TTGA
 
Protein sequence
MKIATWNVNS LNVRKPQVLS WLAQQQPAIL GLQELKQVNE AIDNSDFAAM GYQTLLNGQK 
TYNGVALIYQ EELGEPSDVV CDIPALDDPQ RRVIAATFGE LRVINAYVVN GEAIDSEKYQ
YKLNWLEAFS NWLALEIAQH PNLVVMGDFN IAPSDADVFD PERFKDAVLC SPPERDYFNR
LLAMGFTDAL NCFSNEENNF TWWDYRGGGY RRNHGLRIDH ILTSPAVQAK ATACHVDKEP
RGWERPSDHA PVVLTLA