| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0001 |
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| Symbol | |
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| ID | 8535579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 150 |
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| End bp | 1559 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646382380 |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_003261914 |
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| Protein GI | 261854631 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000259143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACCA TCACATCAGA ACTGTGGCAG CAATGCATTG ATCGGTTGTC CGAAGATCTG
CCCGTTCAGC AGATCAATAT GTGGATCAGA CCGTTGCAAG CAGAGTTGAA GGCGGAAAAC
CATCTGATCC TATGGGCGCC GAACCGTTTT GTCATGGACA TGGTCGCGCA GCAATACAAG
TCGAAAATCC TCGAGCAGGC GCAGATATTG CTCGAACGTC CGGATTTGCA GCTTGGCCTG
CAAGTGGGCA GCGTGCCTTC CGAGCAGCCT GTTGATATGC CCGCCGCCGC CACGCTGTCA
TCGAAGTCCG GCGCAGTGTC CTCGGGTGTT GCGCCGCGTG TCGAGCCTAT GGCGGATTTG
GCTGAACCAG ATACGGGTGC CAAGGAATTT GTCAGCCACA TCAACAAAAA ATTCAATTTC
GATAATTTCG TCGAAGGCAA ATCGAACCAG TTGGCGCGCG CGGCGTCGCA GCAAGTCGCG
CAGAATCCGG GCGTGGGTTA TAACCCGCTT TTTATTTACG GTGGCGTGGG CCTGGGGAAA
ACCCATTTGA TGCAGGCCGT CGGCAACGCG ATTCTCGAGC GTTCGCCGGA TGCCAAGGTG
GTCTATCTGC ACAGTGAGCG TTACGTGCAG CAGATGGTCA GTTCGATCAA GAACAACACG
ATTGAGGAGT TCAAGGACTT CTACCGTTCC GTTAACGCGC TGCTGATTGA CGATATTCAG
TTTTTCGCCG GAAAGCCGCG CAGTCAGGAA GAATTCTTTC ATACGTTCAA TGCGCTGATC
GAGCAGGGTC AGCAGATCAT CATGACCTGC GATCGCTATC CCAAAGAAAT CGAAGGCCTC
GAAGAGCGCT TAAAATCCCG TTTTGGGTGG GGTTTGACCG TGGCGGTCGA GCCGCCCGAT
CTGGAAACGC GCGTAGCGAT TTTGCAGAGC AAGGCGGAGC AATCGCAAAT ATCACTGAGT
ACCGATGTAG CCTTTTTTAT CGCCAAGCGG GTTCGAGCGA ACATTCGTGA ACTTGAAGGC
GCGTTGCGCC GCGTCATTGC GACCGCGCAA TTTACAGGCC GTCCGATTAC GGTGGAGTCC
ACCAAAGAAG CGCTGAAAGA TCAGATCGCG GCGCAGGCCA AGTTGATTAC CCTGGAAAAT
ATCCAGCGCA CGGTTGCCAA GTTTTACAAT CTAAAATTGA CCGACTTGAC GGGTGCGCGC
CGAAACCGTT CCATCGCCCG TCCACGGCAA GTGGCGATGA GTCTGGCCAA GGAACTCACG
AACCATAGTC TGCCGGAAAT TGGCGAGGCC TTTGGTGGTC GAGATCACAC CACGGTGATC
CATGCCTGCA AGAAAATCGA AGAATTGCGC GAGATCGAGT CGAAGCTCAG CGATGATTAC
AACTTGTTGA GACACACATT AAATATATAA
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| Protein sequence | MSTITSELWQ QCIDRLSEDL PVQQINMWIR PLQAELKAEN HLILWAPNRF VMDMVAQQYK
SKILEQAQIL LERPDLQLGL QVGSVPSEQP VDMPAAATLS SKSGAVSSGV APRVEPMADL
AEPDTGAKEF VSHINKKFNF DNFVEGKSNQ LARAASQQVA QNPGVGYNPL FIYGGVGLGK
THLMQAVGNA ILERSPDAKV VYLHSERYVQ QMVSSIKNNT IEEFKDFYRS VNALLIDDIQ
FFAGKPRSQE EFFHTFNALI EQGQQIIMTC DRYPKEIEGL EERLKSRFGW GLTVAVEPPD
LETRVAILQS KAEQSQISLS TDVAFFIAKR VRANIRELEG ALRRVIATAQ FTGRPITVES
TKEALKDQIA AQAKLITLEN IQRTVAKFYN LKLTDLTGAR RNRSIARPRQ VAMSLAKELT
NHSLPEIGEA FGGRDHTTVI HACKKIEELR EIESKLSDDY NLLRHTLNI
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