Gene Pecwa_4593 details

Gene Information

• Locus tag: Pecwa_4593
• ID: 8533043
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 5036067
• End bp: 5036795
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 56%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003261888
• Protein GI: 261823782

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.733202
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTTA CCGTTATCAC CGATAATATC GACTATTTGA TGTGGGGCTC ATTCCCGGAT 
GGTCCACTGG GTGGCGCGGC GCTGACGCTG GTGATGAGCC TGCTGGCGGG TGTAGCATCT 
GCCGTACTAG GCACGATTTT GGGCGTGGCG CTGGCGATGT CGCGAGGCGT ATGGAGCGCA 
CTGTTGGCGA TGGTGCTAGG GTTCTTCCGG GCGATCCCCG TCATCATGCT GATTTTCTGG 
ACGTACTTCC TGCTGCCGAT CGTTTTTGGC GTCGACATTC CTGAAATCAC TACTGTGGTC 
TGTGCGCTGG CGCTGATTGC TTCGGCGTAT CTGGCACATG GCGTGAAAGC CGGTATTGTC 
GCGATTGGGC GCGGCCAGTG GCAGGCTGGG TTATCGTTGG GGCTGAGCCG TTGGCAGGTG 
TTGTGGCAGA TCGTCCTGCC GCAGGCACTG CGGATGATGG TGCCTTCCTT CATTAATCAA 
TGGATCTCCC TGATTAAAGA CACGTCACTG GCCTACATTG TCGGGGTTGG CGAGCTGACG 
TTTCTTGCTA CGCAGGTCAA TAACCGCAGC ATGGTCTACC CGATGGAAGT TTTCCTTTTT 
GTCGCGCTGG TCTACTTTGT TTTTTGCCTG TCGCTGGAGT TGCTGGCTAA CCGGGTTAAC 
GTCCGTTTTA ACCAGCAGCA AAAACAGCCG AAGCGTCGTT TGCTGTGGTG GCGGAATAAG 
CCAGCCTGA 

 

Protein sequence

MDFTVITDNI DYLMWGSFPD GPLGGAALTL VMSLLAGVAS AVLGTILGVA LAMSRGVWSA 
LLAMVLGFFR AIPVIMLIFW TYFLLPIVFG VDIPEITTVV CALALIASAY LAHGVKAGIV 
AIGRGQWQAG LSLGLSRWQV LWQIVLPQAL RMMVPSFINQ WISLIKDTSL AYIVGVGELT 
FLATQVNNRS MVYPMEVFLF VALVYFVFCL SLELLANRVN VRFNQQQKQP KRRLLWWRNK 
PA