Gene Pecwa_4592 details

Gene Information

• Locus tag: Pecwa_4592
• ID: 8533042
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 5035322
• End bp: 5036065
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 56%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003261887
• Protein GI: 261823781

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.504039
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACGG CGCTGCAATC GCTTGAGTCG TGGCTGTTGG CTCCTCAATA CCTCACCTGG 
CTGTGGCACG GTTTCCTGAT CACGCTGGGC CTTTCCCTTG GTACGGTCGT GCTGTCTACG 
GTGTCGGGTT TTCTGCTGGC GGCGGCCAGA GATAGCCAGA TTCATGTGTT GCGTGGCGTT 
GTCGTGGCAT ATAGCTCGCT ATTTCGTAAT ACGCCGCTGC TGGTGCAGTT GTTTTTCTGG 
TATTTCGGTG CCGGACAGCT TTTCCCCTCA GAGATGATGC AATGGCTAAA CGCCCCTCAT 
GCTATTTCAC TATTGGGCAT GACATTAGCG TGGCCTTCTT TTGAATTTTT GGCCGGATTG 
GCAGGGCTGA CGCTCTACTC TAGCGCGTTC ATTGCGGAGG AAATTCGCTC CGGTATTCGC 
GGCGTGGCGC ACGGGCAGAA GTATGCCGCG CAGGCTCTGG GGTTAACGGG CTGGCAATCC 
ATGCGCTACG TGGTGCTGCC GCAGGCGCTA AAAATTGCCC TGCCGCCGCT GCTTGGGCAG 
TACATGAATA TTGTCAAAAA TTCATCACTA ACGATGGCGA TCGGTGTCGC TGAATTGTCC 
TACGCCTCGC GTCAGGTGGA GACGGAAACC TTGCGCACGT TTCAGGCGTT TGGCGTGGCG 
ACGGTGTTGT ACATCGTGAT TATTGCCGTG ATGGAAGGCT GGGGCATGTG GCGTCAGCAG 
CGTGGTCTGG CGGAGAGGCA CTGA 

 

Protein sequence

MDTALQSLES WLLAPQYLTW LWHGFLITLG LSLGTVVLST VSGFLLAAAR DSQIHVLRGV 
VVAYSSLFRN TPLLVQLFFW YFGAGQLFPS EMMQWLNAPH AISLLGMTLA WPSFEFLAGL 
AGLTLYSSAF IAEEIRSGIR GVAHGQKYAA QALGLTGWQS MRYVVLPQAL KIALPPLLGQ 
YMNIVKNSSL TMAIGVAELS YASRQVETET LRTFQAFGVA TVLYIVIIAV MEGWGMWRQQ 
RGLAERH