Gene Pecwa_4539 details

Gene Information

• Locus tag: Pecwa_4539
• Symbol: gidB
• ID: 8532989
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4983682
• End bp: 4984302
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 50%
• Product: 16S rRNA methyltransferase GidB
• Protein accession: YP_003261836
• Protein GI: 261823730

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0125661
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCACAACA CACTCGATAA TCTGCTAAAT GCGGCTGGCA TTGTGATTTC AGACAAGCAA 
AAAAATCTTC TGATACAGTA TGTTGACATG CTGAACAAGT GGAACAAAGC TTATAACCTG 
ACGTCTGTGC GCGATCCGCA GCAAATGCTG ATCCGCCACA TCATGGACAG CATCGTGGTT 
GAGTCACATT TAAGCGGGCA ACGCTTTATC GATGTGGGAA CGGGCCCTGG ATTGCCGGGG 
ATCCCGCTAG CGATTGTTCG CCCTGAGTCG CATTTTACCT TGCTGGATAG CCTAGGTAAG 
CGTGTGCGCT TCCTGCGTCA GGTACAGCAT GAATTGCAGC TTGAGAACAT CACACCGGTA 
CAGAGTCGCG TTGAGGCATT TCCGGCAGAG CCACCTTTTG ATGGCGTGAT AAGCCGGGCA 
TTTGCCTCTT TGCAAGACAT GATTAGCTGG TGTGGTCATC TTCCCGCCAG ACCAACAGGA 
CGGTTTTATG CCCTGAAAGG CGTACTTCCA GAGGATGAAT TGTCATCCTT GCCACAAGAT 
GTCCTATTGG ATCAGGTCGT TCGCTTATCT GTCCCTGATC TGGAAGGTGA ACGCCATTTA 
GTCGTGCTTA AACCAAACTA A 

 

Protein sequence

MHNTLDNLLN AAGIVISDKQ KNLLIQYVDM LNKWNKAYNL TSVRDPQQML IRHIMDSIVV 
ESHLSGQRFI DVGTGPGLPG IPLAIVRPES HFTLLDSLGK RVRFLRQVQH ELQLENITPV 
QSRVEAFPAE PPFDGVISRA FASLQDMISW CGHLPARPTG RFYALKGVLP EDELSSLPQD 
VLLDQVVRLS VPDLEGERHL VVLKPN