| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4538 |
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| Symbol | |
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| ID | 8532988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 4981710 |
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| End bp | 4983599 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_003261835 |
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| Protein GI | 261823729 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.130078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTATC CAGATCCATT TGACGTCATC GTGATCGGTG GCGGTCATGC CGGAACAGAA
GCGGCTATGG CTTCTGCCCG AATGGGCCAA CAGACGCTTT TACTCACGCA CAATATTGAT
ACGCTGGGAC AAATGTCTTG TAATCCGGCG ATCGGCGGTA TTGGAAAAGG CCATCTGGTT
AAAGAGATCG ATGCCATGGG AGGGTTGATG GCGCGTGCCG TCGATCAGGC AGGGATACAG
TTTAGGATAC TAAACAGCAG TAAAGGCCCG GCGGTCAGAG CCACTCGCGC ACAAGCGGAT
CGCGTGCTCT ATCGTCAGGC CGTTCGCACC GCTCTGGAGA ATCAGCCAAA CTTGACGATC
TTCCAGCAGG CTGTTGACGA TCTGATTGTG GAAAACGATC GCGTCGTTGG TGCGGTTACC
CAGATGGGAC TAAAATTTCG TGCCAAAGCC GTGGTGCTAA CCGTGGGTAC TTTCCTTGAC
GGCAAGATCC ACATCGGACT CGATAACTAC AGCGGCGGAC GAGCAGGCGA TCCACCGTCT
ATTCCTCTTG CACGCCGCTT GCGTGAACTG CCTCTGCGCG TTAACCGCTT GAAAACCGGT
ACTCCACCAC GTATTGACGC CAGAACGATC GATTTTAGCG TGTTGGCACA GCAGCACGGT
GACAACCCAA TGCCGGTTTT TTCATTCTTG GGTAACGCAA GCCAGCATCC AGCGCAAATG
CCGTGTTACA TCACGCATAC CAATGAGAAA ACGCATGATG TGATCCGTAA TAATCTGGAT
CGTAGCCCTA TGTATGCCGG GATCATCGAA GGGATCGGCC CGCGCTACTG CCCCTCGATC
GAAGACAAAG TGATGCGTTT TGCCGATCGA AACACCCATC AGATCTTTCT TGAACCTGAA
GGGCTGACTA GCAACGAAAT TTATCCCAAC GGGATTTCAA CCAGTTTACC GTTTGACGTC
CAGTGGCAGA TCGTTCGATC AATGGCTGGG ATGGAAAATG CACGTATCGT TCGCCCTGGC
TATGCCATTG AGTACGATTT CTTCGATCCT CGCGATCTGA AGCCTACGCT GGAAAACAAA
CACGTTCATG GTCTGTTCTT CGCTGGGCAA ATCAACGGAA CAACCGGGTA TGAAGAAGCG
GCGGCACAGG GGATGTTGGC AGGGCTGAAT GCGGCTCGGT TGGCTGCCGA TAAAGAAGGC
TGGTCACCGC GTCGCGATCA AGCCTATCTC GGCGTGTTGG TTGACGATCT CTGTACACTA
GGTACAAAAG AACCCTACCG TATGTTTACA TCACGCGCTG AATATCGCCT GATGCTACGT
GAAGATAACG CCGATCTCCG CTTGACCGAG ATGGGTCGCG AACTAGGAAT GGTCGACGAT
GAGCGTTGGG CTCGTTTCAA CGAGAAGCTT GAGAATATTG AGAAAGAGCG CCAGCGCTTG
CGTGACATTC ACGTTCATCC TCAATCTGAG CAGTTAGACC AAATCAATTC GTTGCTGAAA
ACACCGTTGT CGCGTGAAGC GAACGGTGAA GAACTGCTAC GTCGCCCAGA AGTGGATTAC
CTTCAGCTCA CTGCGCTACC GCTGTTTTCC CCTGGGTTAG CCGACGAGCA GGCTGCAGAA
CAGGTTGAAA TCCAAGTCAA ATATGAAGGG TATATTGCTC GTCAGCAGGA TGAAATTGAG
AAACAGTTAC GCAATGAAAA TGCGCTTCTA CCTGCCGATC TGGATTACAA GCAGGTGAAT
GGATTGTCCA ACGAGGTTAT TGCCAAGCTG AACGATCACA AACCCTCTTC TATCGGCCAG
GCCTCGCGTA TATCTGGCAT TACGCCTGCG GCAATCTCAA TTCTATTGAT CTGGCTTAAA
AAACAGGGTC TGCTGCGTCG CAGCGCCTGA
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| Protein sequence | MFYPDPFDVI VIGGGHAGTE AAMASARMGQ QTLLLTHNID TLGQMSCNPA IGGIGKGHLV
KEIDAMGGLM ARAVDQAGIQ FRILNSSKGP AVRATRAQAD RVLYRQAVRT ALENQPNLTI
FQQAVDDLIV ENDRVVGAVT QMGLKFRAKA VVLTVGTFLD GKIHIGLDNY SGGRAGDPPS
IPLARRLREL PLRVNRLKTG TPPRIDARTI DFSVLAQQHG DNPMPVFSFL GNASQHPAQM
PCYITHTNEK THDVIRNNLD RSPMYAGIIE GIGPRYCPSI EDKVMRFADR NTHQIFLEPE
GLTSNEIYPN GISTSLPFDV QWQIVRSMAG MENARIVRPG YAIEYDFFDP RDLKPTLENK
HVHGLFFAGQ INGTTGYEEA AAQGMLAGLN AARLAADKEG WSPRRDQAYL GVLVDDLCTL
GTKEPYRMFT SRAEYRLMLR EDNADLRLTE MGRELGMVDD ERWARFNEKL ENIEKERQRL
RDIHVHPQSE QLDQINSLLK TPLSREANGE ELLRRPEVDY LQLTALPLFS PGLADEQAAE
QVEIQVKYEG YIARQQDEIE KQLRNENALL PADLDYKQVN GLSNEVIAKL NDHKPSSIGQ
ASRISGITPA AISILLIWLK KQGLLRRSA
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