Gene Pecwa_4530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_4530 
Symbol 
ID8532980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp4971826 
End bp4972488 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003261827 
Protein GI261823721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0698088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAT TGTTAATCGA AGACGATCGC CTGATCGGTG ATGGCCTAAA AGCTGGGTTG 
ACCAAACTGG GCTTTACTAT TGACTGGTTT ACGGAAGGTA AAGCGGGTGC CGCCGCATTG 
AAGGCCGCAC CTTATGATGC TGTGGTGCTC GATCTCAGCC TGCCGGGTAT GGATGGGATG 
GATATCCTAC GCCAGTGGCG TCAGGCTGGA CATGACGAAC CGGTACTGAT TCTGACCGCC 
CGTGATGCGC TGGAACAGCG CGTGGAAGGG TTGCAACAGG GTGCCGATGA TTATTTATGT 
AAGCCTTTTG CACTGACGGA AGTTGCCGCT CGTCTACAGG CACTGATTCG CCGCCGTCAC 
GGCCAGCTCC AACCTGAATT AACGCACGGT TCGGTTTCCC TTGAACCGGG ATCGCGGAGC 
GTCACGCTTA ACTGCGAGCC GTTGATACTA AAATCCCGCG AACTGGCGCT GCTGGAACTG 
TTTTTGCTCA ATCCAAACCG TGTACTCACC CGTGCGCAGT TAGAAGAAAA GCTCTATGGG 
TGGGACGATG ATGTCTCCAG CAATGCGGTC GAAGTGCATA TCCACCACCT GCGAAAAAAG 
CTGGGCAGCG GGTTTATCCG TACCGTGCAT GGCATTGGCT ATATTCTGGG AGATGCACCA 
TGA
 
Protein sequence
MRILLIEDDR LIGDGLKAGL TKLGFTIDWF TEGKAGAAAL KAAPYDAVVL DLSLPGMDGM 
DILRQWRQAG HDEPVLILTA RDALEQRVEG LQQGADDYLC KPFALTEVAA RLQALIRRRH 
GQLQPELTHG SVSLEPGSRS VTLNCEPLIL KSRELALLEL FLLNPNRVLT RAQLEEKLYG 
WDDDVSSNAV EVHIHHLRKK LGSGFIRTVH GIGYILGDAP