| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4502 |
|---|
| Symbol | |
|---|
| ID | 8532946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4939400 |
|---|
| End bp | 4941223 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | GTP-binding protein TypA |
|---|
| Protein accession | YP_003261801 |
|---|
| Protein GI | 261823695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.622829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAAA ATTTGCGTAA CATCGCCATT ATTGCGCACG TTGACCATGG GAAAACCACC
CTGGTTGACA AGCTGTTGCA ACAATCCGGA ACGTTCGGTG AACGTGTCGA AGCAACTGAG
CGTGTAATGG ACTCCAACGA TTTGGAGAAA GAGCGTGGAA TTACCATCCT CGCAAAAAAT
ACCGCCATTA ATTGGAAAGA CTACCGTATT AACATCGTAG ACACCCCGGG ACACGCCGAC
TTCGGCGGCG AGGTTGAGCG TGTTATGTCG ATGGTTGACT CGGTACTGCT GGTTGTTGAT
GCGATGGATG GTCCGATGCC GCAAACGCGT TTCGTGACCA AAAAAGCATT TGCCAACGGT
CTGAAGCCTA TTGTGGTTAT CAACAAAGTC GACCGTCCTG GTGCGCGTCC TGACTGGGTT
GTCGATCAGG TATTCGACCT GTTCGTGAAC TTGGATGCGA CCGACGAGCA ACTGGATTTC
CCGATCATTT ATGCTTCTGC GCTGAATGGT ATCGCGGGCC TCGACCATAC CGACATGGCG
GAAGATATGA CTCCGCTGTA TCAGGCGATT GTCGATCACG TTTCTCCGCC TCAGGTTGAG
ATGGATGCGC CGTTCCAGAT GCAGATTTCT CAACTGGACT ACAACAACTA TGTTGGTGTT
ATCGGTATCG GCCGTATCAA ACGCGGTAAA GTTAAGCCTA ACCAACAAAT TACTATTGTT
GATAGCGAAG GCAAAACCCG TAACGGTAAA GTGGGTAAAG TTCTGACTCA CCTGGGTCTG
GAGCGTATCG ACGCAACTGA AGCGGAAGCG GGCGATATCA TCGCGATTAC CGGTCTGGGC
GAACTGAACA TTTCTGACAC TATCTGCGAT CCGCAGAATG TCGAAGCACT GCCAGCGCTG
AGCGTCGATG AACCTACCGT TACCATGTTC TTCAACGTCA ATACTTCACC ATTCTGCGGT
AAAGAAGGTA AGTATGTGAC GTCGCGCCAG ATTCTAGAGC GTCTGAACAA AGAACTGGTG
CACAACGTTG CCCTGCGCGT TGACGAAACC GAAGACGCTG ATGCGTTCCG CGTTTCTGGC
CGTGGTGAAT TGCACTTGTC AGTTCTGATC GAAAACATGC GCCGTGAAGG TTTTGAACTG
GCCGTATCAC GTCCGAAAGT TATCAATCGC GTTATCGACG GTCGTAACCA AGAGCCGTTT
GAAAACGTGA CGCTGGATAT CGAAGAACAG CACCAAGGTT CAGTCATGCA AGCCATGGGT
GAGCGTAAAG GTGATGTGAA AGACATGATC CCAGATGGCA AGGGTCGTAT CCGTCTGGAT
TACCTGATCC CTGCTCGTGG TCTGATCGGT TTCCGTACCG AATTCATGAC CATGACGTCT
GGTACAGGTC TGCTGTACTC CACTTTCAGC CACTACGATG ATGTGCGTCA GGGTGAAATT
GGCCAACGTC AGAACGGTGT ACTGGTCTCT AACGGTCAGG GTAAAGCGGT TGCGTTTGCA
CTGTTCAGCC TGCAAGACCG CGGTAAGCTG TTCCTCGGGC ACGGTGCAGA AGTGTATGAA
GGCCAGATTA TCGGTATTCA CTCACGTTCT AACGATCTGA CCGTAAACTG TCTGACTGGT
AAGAAACTGA CCAACATGCG TGCATCAGGT ACTGATGAAG CCACCACGCT GGTTCCGGCT
ATCAAAATGT CTCTGGAGCA AGCGCTGGAG TTCATTGATG ATGACGAATT GGTTGAAGTT
ACGCCGCAGT CTGTTCGTAT TCGTAAGCGT CACCTGACCG AAAACGATCG TAAGCGCGCG
AGCCGCGGCA GCAAAGACGT CTAA
|
|---|
| Protein sequence | MIENLRNIAI IAHVDHGKTT LVDKLLQQSG TFGERVEATE RVMDSNDLEK ERGITILAKN
TAINWKDYRI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AMDGPMPQTR FVTKKAFANG
LKPIVVINKV DRPGARPDWV VDQVFDLFVN LDATDEQLDF PIIYASALNG IAGLDHTDMA
EDMTPLYQAI VDHVSPPQVE MDAPFQMQIS QLDYNNYVGV IGIGRIKRGK VKPNQQITIV
DSEGKTRNGK VGKVLTHLGL ERIDATEAEA GDIIAITGLG ELNISDTICD PQNVEALPAL
SVDEPTVTMF FNVNTSPFCG KEGKYVTSRQ ILERLNKELV HNVALRVDET EDADAFRVSG
RGELHLSVLI ENMRREGFEL AVSRPKVINR VIDGRNQEPF ENVTLDIEEQ HQGSVMQAMG
ERKGDVKDMI PDGKGRIRLD YLIPARGLIG FRTEFMTMTS GTGLLYSTFS HYDDVRQGEI
GQRQNGVLVS NGQGKAVAFA LFSLQDRGKL FLGHGAEVYE GQIIGIHSRS NDLTVNCLTG
KKLTNMRASG TDEATTLVPA IKMSLEQALE FIDDDELVEV TPQSVRIRKR HLTENDRKRA
SRGSKDV
|
|---|
| |