Gene Pecwa_4479 details

Gene Information

• Locus tag: Pecwa_4479
• ID: 8532922
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4908411
• End bp: 4910453
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 57%
• Product: oligopeptidase A
• Protein accession: YP_003261778
• Protein GI: 261823672

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAATC CATTACTGAC CTCATTTACC CTGCCCCCGT TCTCCAGTAT TAAAACGGAA 
GATATTGTCC CGGCAGTAAA ATCCGCGTTG GATGAATGCC GCGAGACGGT AGAGCGTGTG 
GTCGCGCAAG CGGGGCCGTT TACGTGGGAT AATCTGTGTC AGACGCTGGC AGACAGCGAC 
GATCGCCTTA GCCGCATTTT TTCCCCCATC GGCCATCTGA ATGCGGTGAA GAACAGCCCG 
GAGCTGCGCG GTGTTTATGA ACAATGTCTG CCGTTGTTAT CCGAGCACAG TACCTGGGTT 
GGCCAACATG CCGGGCTGTA TCAGGCCTAT CGCAGCCTAC GTGACGGCGA ACATTACGCC 
ACACTGAGTC TGGCACAGAA GAAATCCGTT GATAACGCGC TGCGCGATTT TGAATTGTCC 
GGTATCGGCC TGTCGCCGGA AAAACAGAAA CGCTATGGCG AAATTTCCGC TCGACTGTCT 
GAACTCGGCT CGCAGTACAG CAACAACGTG CTGGATGCTA CGATGGGCTG GAGCAAGTTG 
ATTACCGACG TCGCCGAGCT GGATGGTATG CCGGAAAGCG CGTTGGCCGC CGCCAAAGCG 
CAGGCGGAAG CCAAGGAGCA GGATGGCTGG TTGCTGACGC TGGATATCCC GAGTTACCTA 
CCAGTGCTAA CCTACTGCAC CAATCAGGCA CTACGTGAAG AGATGTACCG CGCGTTCGGC 
ACCCGCGCGT CCGACCAAGG GCCGAACGCG GGCAAGTGGG ACAACAGCGA AATTATGGCG 
GAAGAGCTAG CGCTGCGTCA CGAACTGGCA CAACTGCTGG GCTTCGACAG CTATGCACAC 
AAGTCGCTGG CAACCAAAAT GGCGGAAAAC CCGCAGCAGG TACTCGATTT CCTGACCGAT 
CTGGCGAAAC GAGCCCGTCC ACAGGCTGAA GAAGAACTCG CACAGTTGCG CGCCTTTGCC 
AAAGAACACT ACGGCGTAGA GGAATTGCAG GCCTGGGATA TCACCTACTA CAGCGAACAA 
CAGAAGCAAC ACCTGTATTC CATCAGCGAT GAGCAACTGC GGCCGTACTT CCCGGAAAAC 
CGCGCGGTGA ATGGCCTGTT TGAAGTGGTT AAACGCATCT ACGGCATCAC AGCCAAAGAG 
CGTAACGATG TGGACGTGTG GCACCCGGAT GTTCGCTTCT TCGATCTGTT CGATGAACGC 
GGTGAACTGC GCGGCAGCTT CTACCTCGAT CTGTATGCCC GTGAACACAA GCGTGGCGGG 
GCGTGGATGG ATGACTGCGC AGGTAAACTG CGTAAAGGTA ACGGCGAGCT GCAAAAACCG 
GTCGCCTATC TGGTTTGTAA CTTCAACCGC CCGGTCAACG GCAAACCCGC TCTGTTCACC 
CACGACGAAG TCACAACCCT CTTCCACGAG TTCGGTCACG GCTTGCACCA TATGCTGACC 
CAGATCGATA CCGCCGGCGT GGCGGGCATC AACGGTGTAC CGTGGGATGC GGTCGAACTA 
CCGAGTCAGT TCATGGAAAA CTGGTGCTGG GAACCCGAAG CGCTGGCCTT TATTTCCGGC 
CACCACGAAA CCGGCGAACC GCTGCCGCAG GAACTGCTGG ATAAAATGCT GGCGGCGAAA 
AACTATCAGG CTGCGCTGTT CATTCTGCGT CAGTTGGAAT TCGGCCTGTT CGATTTCCGT 
CTGCATGCCG AGTTTAACCC TGCAAAAGGC GCGCAGATCC TGCCAACGCT GGCGGAAGTC 
AAAGCGCAGG TAGCCGTAGT GCCAAGCCCA AGCTGGGGTC GTTCCCCACA CGCATTCAGC 
CACATCTTCG CGGGCGGTTA TGCCGCAGGC TACTACAGCT ACCTGTGGGC CGACGTACTG 
GCAGCCGATG CCTACTCTCG CTTTGAGGAA GAAGGGATCT TCAACCGCGA AACCGGTCAG 
TCATTCTTGG ATAACATCCT GACCCGCGGC GGTTCTGAAG AGCCAATGGA GCTGTTCAAA 
CGCTTCCGTG GTCGTGAACC TCAGCTTGAT GCCATGCTCG CGCATTACGG CATAAAAGGA 
TGA 

 

Protein sequence

MTNPLLTSFT LPPFSSIKTE DIVPAVKSAL DECRETVERV VAQAGPFTWD NLCQTLADSD 
DRLSRIFSPI GHLNAVKNSP ELRGVYEQCL PLLSEHSTWV GQHAGLYQAY RSLRDGEHYA 
TLSLAQKKSV DNALRDFELS GIGLSPEKQK RYGEISARLS ELGSQYSNNV LDATMGWSKL 
ITDVAELDGM PESALAAAKA QAEAKEQDGW LLTLDIPSYL PVLTYCTNQA LREEMYRAFG 
TRASDQGPNA GKWDNSEIMA EELALRHELA QLLGFDSYAH KSLATKMAEN PQQVLDFLTD 
LAKRARPQAE EELAQLRAFA KEHYGVEELQ AWDITYYSEQ QKQHLYSISD EQLRPYFPEN 
RAVNGLFEVV KRIYGITAKE RNDVDVWHPD VRFFDLFDER GELRGSFYLD LYAREHKRGG 
AWMDDCAGKL RKGNGELQKP VAYLVCNFNR PVNGKPALFT HDEVTTLFHE FGHGLHHMLT 
QIDTAGVAGI NGVPWDAVEL PSQFMENWCW EPEALAFISG HHETGEPLPQ ELLDKMLAAK 
NYQAALFILR QLEFGLFDFR LHAEFNPAKG AQILPTLAEV KAQVAVVPSP SWGRSPHAFS 
HIFAGGYAAG YYSYLWADVL AADAYSRFEE EGIFNRETGQ SFLDNILTRG GSEEPMELFK 
RFRGREPQLD AMLAHYGIKG