| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4474 |
|---|
| Symbol | |
|---|
| ID | 8532917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4902196 |
|---|
| End bp | 4904925 |
|---|
| Gene Length | 2730 bp |
|---|
| Protein Length | 909 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | heat shock protein DnaJ domain protein |
|---|
| Protein accession | YP_003261773 |
|---|
| Protein GI | 261823667 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACAC TGTGCTGGCA GCGACTCGGC ATTGCACCGA CTCAAGATCT GGATGTTATC
CGTCAGGCTT ATCGTCAGAA AGTGCCACAG TTTCACCCAG AAACCGATCC CGATGGCTTT
AAACAGTTGC GCGAGGCATA CGATGCTGCC TGCAAGCTGG CGAAAAACCC GGTGCTGTTG
GGTGATGAAG AACACGCTAA TACTGGATCG CGCGACGCGG CTTCGTCAAC CGAGAATGCC
GCTACTGATA ACGCCGATCC CCAGGCTGAA GCGCTAGTTA GCGCGTTTGA TCGGCTGTTA
AGCAACCCAG CCGAACGCGT GGTTCCGCTG TATTGGGAAC GTTACATTCA GTTGCTGAAT
CAGCAGGCTT TCGATGTGAT CGATCGTATT CGCTGGCCGC TACTCCAGCG CCTCATGCGC
GAGTCTTGTA TCTCAATCCA CTGTGTCCGC GTACTGGCCG AACGCCTACG CTGGCAGCAG
CGACAGGGAG AACTATCTGG CGATGGCGTG GAAGAAATCC ATCACTTCCT CGACTCGCTC
GGTTATGAGG ATCTGTTCGA TTTTTCCTTG CTGTCACACC TGAGCTTGCC CGCACAGCTC
GAAACCATCT TCTATTTTCA TCAGGCTAAT AGCACGTACT GGAACCGCCC GGCATTTATG
CTGAGCATGC TGCTGCGTAA TCCGACGGCC ATTTATTGGC CTGACATCCC AGCGCTGATG
CAAAAGCTCG CACGCTGGCA CAACCACGCG GGTGTTCCCA GCGCCATACT ACGTGATTAC
TGCCTGCAAC AGTTGGACGC CGCGCCGAAC GACGCCGAAT GGCTCGCACT CAGCGCCAAT
CTCTGTTCAC TTACCGGAGA GGACGAGCAA GCCTTCACGC TGTGGTTGAC GCTTTATCAG
CAAACCCACC ACGCACAGGC TGAACAATGG CTGATCGGCT GGTGTCAACA ACATCAGCCG
GACGCCCTTC CCTTACTGAT TCAGTCGCTC AATGATACTC CAGCACCCGA TCTGACAGGG
CTAGCGCTGG ACGATCCACG CCAGCGTTTC TTCATTTCAC AGCACAATAC CCACATGCTG
ATTCGCTGGG GAGAAGCGCT GAAATTGCCG CTGTCGCCCA TGGCGAAAAG CTACACGCTC
TGGAAGCTGG GAAAACAGGA TCTGCGAGGC ATCTATCAGC ACTTGCTGCT ACATAGCGGG
GACACGATTC AGGATCGCCT GTACTGGCAC GCCTGTATGT TAACCGTGGG TAATGAGCAC
TTGTTACAGG ATATTCTGGC GCAGCCGTTG CCCGATGAAC CGCTGTATGC GTTGATCTTA
CAAGGGTTGC AGTTTCAGGC GAGGCAGCGC TTATCCTGGC TGAAAACCTC CGGGGCGATT
CACACCTTCA CGGAGTGGCT GTATTCAGAG TCAGAAGAAG AATTGCCGAG CGCGTGTACC
GACCAGAAAT CGTCCGCCTG GCTGCAAGTG CAAGCCTGGT TGCGGCAATG GCGCCCGCTG
TCGCTGAACC AGCTTAACAA GCTGTATAGC AGCAGCATCC ACACGGAGGA AATCGACCCA
ATCAACGATT GTCTGGTCGA ACTGTCCGCA CGTTACGCGT GTGATGCCTC TCTGGCACCG
CAAGGGGGAA ATACGCCGCA GGATCTCAGC GCCAGAGAGG AACTGAGGCA GGCTATCTTC
ATTGCATTAA TGATGACCGA TCCAATATCT TGTCTGGGTT TACCGCGCCA GTCGGTGCTA
CCCGAACTGG CTTTAACCCA CCCAGCGCAT TCACTTTCTC GACTCTTCCG CAAGGCGGAA
TGCCGCGATG GCGATGCGGC CACGCCGCTG AAAAAGCAGC TAGTGCTCAC TGACCCGCTG
CACTATCACT GTTGGATGAA TTTCCCTGTC TCTATCGAGG AATATCTCGC CAGCGGGGAA
ATTTATGGCG AGTCCGCCGC CAGCCATTTT TATCTTACCG ATGATCGCTG GCAAGCAGAG
CTAGCGAAAT CCCCCCTCAT CTATCAGATC TTTTTCCACG CGTTTTACGC CTTGATGGGG
GACGAAGAAC AAGCAGGACA ACACCGTGAG CGGCTGGCAG ATCTACCCGT TGAAACACAG
CAGGAAGATG ATATTCGTAC CGCCTTTATC GAAGAATCGG ATGAGCTGGA AAAACCATTA
AAACAGCTCT CTGACGACAA ACGCATCACG CTCGTCGGCC AGTTGATTCA AAGCTACGCG
AAGAATCACG AATACTTATT TGATAATAGC GATCAACGCT TTTTAACCGA ACATCTGTTC
TATCCGCATG AAGACATCAC GCTGAAATTG ATCGCAAAAG TGCTGCTGCA ATGCACCGAT
CGGCGAGAAC ATCAGTTCAG CCTACTGCAG GCCCGAAAAA GCGACTGGTG GCAATTTTGG
CGCACCAACA CACGCATTGG TCGTATCGGT TTCCTGATAC AAGGTGGATT GGGGAGTTAT
TGTCTTTACC GAGCAAGCGA CTGGCTAGGG TCGCCACCGC CGTATATTGA AGGGCTACTG
ATGGTGCTAA TGGTCTGCAA TTTACTGAGT GCCGTGCGTC GCCGCTATAA CGATGTCGGC
GTTCGTGCGC CATGGGGTAT GAGTTTCTTC AGCCTACTCA TACCGGTATG TTTGCTGATC
CCACTGCTGG CGCCAAGCCT TAACCGCTGG AATAAATTCG GTCCACCGCC GCGCGGCAAG
AAAGCCGACA CCGATACCAC GTTTGCCTGA
|
|---|
| Protein sequence | MDTLCWQRLG IAPTQDLDVI RQAYRQKVPQ FHPETDPDGF KQLREAYDAA CKLAKNPVLL
GDEEHANTGS RDAASSTENA ATDNADPQAE ALVSAFDRLL SNPAERVVPL YWERYIQLLN
QQAFDVIDRI RWPLLQRLMR ESCISIHCVR VLAERLRWQQ RQGELSGDGV EEIHHFLDSL
GYEDLFDFSL LSHLSLPAQL ETIFYFHQAN STYWNRPAFM LSMLLRNPTA IYWPDIPALM
QKLARWHNHA GVPSAILRDY CLQQLDAAPN DAEWLALSAN LCSLTGEDEQ AFTLWLTLYQ
QTHHAQAEQW LIGWCQQHQP DALPLLIQSL NDTPAPDLTG LALDDPRQRF FISQHNTHML
IRWGEALKLP LSPMAKSYTL WKLGKQDLRG IYQHLLLHSG DTIQDRLYWH ACMLTVGNEH
LLQDILAQPL PDEPLYALIL QGLQFQARQR LSWLKTSGAI HTFTEWLYSE SEEELPSACT
DQKSSAWLQV QAWLRQWRPL SLNQLNKLYS SSIHTEEIDP INDCLVELSA RYACDASLAP
QGGNTPQDLS AREELRQAIF IALMMTDPIS CLGLPRQSVL PELALTHPAH SLSRLFRKAE
CRDGDAATPL KKQLVLTDPL HYHCWMNFPV SIEEYLASGE IYGESAASHF YLTDDRWQAE
LAKSPLIYQI FFHAFYALMG DEEQAGQHRE RLADLPVETQ QEDDIRTAFI EESDELEKPL
KQLSDDKRIT LVGQLIQSYA KNHEYLFDNS DQRFLTEHLF YPHEDITLKL IAKVLLQCTD
RREHQFSLLQ ARKSDWWQFW RTNTRIGRIG FLIQGGLGSY CLYRASDWLG SPPPYIEGLL
MVLMVCNLLS AVRRRYNDVG VRAPWGMSFF SLLIPVCLLI PLLAPSLNRW NKFGPPPRGK
KADTDTTFA
|
|---|
| |