Gene Pecwa_4445 details

Gene Information

• Locus tag: Pecwa_4445
• Symbol: mtlR
• ID: 8532888
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4870104
• End bp: 4870667
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 51%
• Product: mannitol repressor protein
• Protein accession: YP_003261744
• Protein GI: 261823638

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTGTG CGGGTTTAAA GGGTCGAGAA GTGACGATGG AAGAAACACA GGCGTTTGAA 
AACCGGGTTC TGGAAGCGCT GAACTCAGGG AAGACAGTGC GCGATTTTAT GCTCTGTGCC 
GTTGAATTGC TGGCTGAAGC GGCTAGCATC CTGATGTTGC AGGTGTTCCG TAAAGACGAT 
TATGCGGTGA AATATGCCGT TGAACCTCTG ATGACGGGAA CGGGGCCACT GGGTGACCTT 
TCCGTGCGCC TGAAACTGAT TTATGGCCTG GGGATGATCA GCCGTAAAGA GTATGAAGAT 
GCGGAATTGT TAATGGCGCT GGGCGAAGAG CTAGCACATG ACGATCGGCA CTATCGTTTT 
ACCGATGATG AAATTCTGGG GCCCATTGGT GAATTGCACT GCGTTGCGGC ATTGCCCGCA 
GAACCGGCTT TGCCATTGGG GGCAGATGCC GATCCGCTTC TGGTGAGTAT GCAACAGCAG 
CGTTATCAGC AGATGGTGCG TTCCACGCTG GTTTTATCCT TGACCACATT GATTGCGCAA 
ATCAGTCTGA AAAAGGCGTT TTAA 

 

Protein sequence

MLCAGLKGRE VTMEETQAFE NRVLEALNSG KTVRDFMLCA VELLAEAASI LMLQVFRKDD 
YAVKYAVEPL MTGTGPLGDL SVRLKLIYGL GMISRKEYED AELLMALGEE LAHDDRHYRF 
TDDEILGPIG ELHCVAALPA EPALPLGADA DPLLVSMQQQ RYQQMVRSTL VLSLTTLIAQ 
ISLKKAF