Gene Pecwa_4428 details

Gene Information

• Locus tag: Pecwa_4428
• ID: 8532871
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4849527
• End bp: 4850264
• Gene Length: 738 bp
• Protein Length: 245 aa
• Translation table: 11
• GC content: 37%
• Product: transcriptional regulator, LuxR family
• Protein accession: YP_003261727
• Protein GI: 261823621

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCAGT TATTCTACAA CAATGAAACT ATAAGCAGGA TAATAAAAAG TCAATTCGAT 
ATGGCATTAA GCCACTACGG TGACATCAAA TATGCCTACA TGGTGTTAAA TAAAAAGAAG 
CCAACAGAGA TTTTGATTAT TTCCAATCAC CATGATGAGT GGCGAGAGAT ATACCAAGCA 
AATAACTACC AACACATTGA TCCTGTGGTC ATTGCAGCCC TTAATAAAAT CACGCCTTTC 
CCTTGGGACG AAGATTTACT TGTCAGCACA CAACTGAAGA TGTCAAAGAT ATTTAACTTA 
TCCAGAGAGC ATAACATCAC CAACGGCTAC ACTTTTGTTC TTCATGACCA CAGTAACAAT 
CTGGTTATGC TGTCAATCAT GATTGATGAA TCTAATGTAA GTAACATCGA TGACGTAATC 
GAGAGTAATA AAGATAAGTT ACAAATGACG TTGATGACTA TTCATGCAGA AACCATCTCT 
CTTTACAGAG AGATGATTAG AAACAAGGAA GATGAAAGAT CGAATGATAA AGATATTTTT 
TCTCAACGGG AAAATGAAAT TCTTTATTGG GCCAGTATGG GTAAAACCTA TCAGGAGATA 
GCACTGATAT TAGATATTAA AACAGGCACC GTTAAATTTC ACATCGGCAA TGTTGTGAAA 
AAACTCGGCG TATTAAATGC CAAACATGCG ATCAGACTTG GCATCGAGCT ACAACTTATC 
CGACCGGTTC AGTCATAG 

 

Protein sequence

MSQLFYNNET ISRIIKSQFD MALSHYGDIK YAYMVLNKKK PTEILIISNH HDEWREIYQA 
NNYQHIDPVV IAALNKITPF PWDEDLLVST QLKMSKIFNL SREHNITNGY TFVLHDHSNN 
LVMLSIMIDE SNVSNIDDVI ESNKDKLQMT LMTIHAETIS LYREMIRNKE DERSNDKDIF 
SQRENEILYW ASMGKTYQEI ALILDIKTGT VKFHIGNVVK KLGVLNAKHA IRLGIELQLI 
RPVQS