Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4397 |
Symbol | |
ID | 8532840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4818357 |
End bp | 4820228 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003261696 |
Protein GI | 261823590 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0655491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGATA TCATGCACGC GGGTGCCGCC ACAGCACCCG GTAACGCCTC CAGACCTGTA CTGGAAATCG ACGATCTGAG CGTTAGTTTT AGCGGCCGTT CCGGCACGCA TCAGGCACTA AAAGGCATTT CCTTTACCGT CAATAAAGGG GAAGTGGTCG CCGTGGTAGG CGAAAGTGGT TCAGGTAAAT CCGTGACATC ACTCACCGTG ATGGGATTGC TGGCAGATTC TGCCAACATC GGGCACGGTG CAATCCGTTT CACCGCACGC GACGACCAAC AACATGACTT GTTGAGCATG AAAGCAGAAG CGCGCCGTAA GCTGCGCGGC CGCGAGCTCG CCATGATCTT TCAGGAACCG ATGACCTCAC TGAATCCGGT GCTGAAAGTC GGCGATCAGC TCACCGAAGC CCTGCTTGAT CACGAAATCT GTGATGCCGC CAGTGCCGAC AAAAAAGCCC GTGAACTGCT GCGCAAAGTG CGCATTGCAG ACGTCGATCG CGTGATGAAA AGCTACCCGC ACTCGCTGTC CGGCGGGATG CGCCAACGTG TGATGATTGC CCAAGCGCTG GCCTGCGATC CGCAACTGTT GATAGCTGAT GAACCCACCA CCGCGTTGGA TGTCACCGTG CAGGCACGCA TTCTGCAAAT CCTGCGCGAC CTGCAACAAC AGAGCGACAT GGCGGTATTG TTTATTACCC ACGATATGGG CGTAGTCGCA GAAATCGCTG ACCGCGTCGT GGTGATGTAT CGCGGCGAAA TCGTAGAGCA AGGCACTGTC GAACAGATTT TCGCAGCACC GCAGCACCCA TACACCCAAT CGCTGCTGGC CGCCGTACCC AAACTGGGCG ACATGCGCGA GAGCCTGTGG CCGAAACGCT TCCCGCTGTT GGGGCAGGCC GCCGACCCAG ACAACATTGA ACAGGTTACC GCCCGCTATG ATGCCGAACC GCTGTTAGAT ATTCGCGGGC TGCGCGTCTA TTACCCGATA CGCAGTGGGA TTTTATCTAA GGTGACCCAC CACGTTCACG CGGTAGAGCA GATCGATTTC AACGTCTGGC CGGGCGAAAC GCTGGCGATC GTCGGCGAAA GCGGCTGTGG CAAATCCACC ACCGGACGCG CCCTGCTGCG TCTGGTACAG AGCGAAGCCG AGAGCATTCA TTTTCAGGGC AACGAAATTT CTCAGATGAA AGAGCGCGAT TTCCAGCCGC TGCGTCGGGA AATGCAGATG GTGTTTCAAG ACCCGTATGC CTCGCTCAAT CCGCGCCTGA CGGTCGGCTT CACCATCGCT GAACCGCTGC TGCTGCACGG GTTGGTGAAA TCACTGGAAG AGGCAACGCC GCAGGTACAG GCGCTGCTCA AAAGCGTCGG TCTATTGCCT GAACACGCTC GCCGTTATCC ACACGAATTT TCCGGCGGAC AGCGCCAGCG TATCGCGATT GCCCGCGCGA TGGCGCTACA ACCCCAGGTC ATTATTGCTG ACGAAGCCGT CTCGGCGCTC GATGTGTCAA TTCAGGCACA GGTCGTCAAC CTGATGATGG ATCTCCAGAA GAAAACCGGC GTGTCGTGGA TTTTCATCTC GCACGATATG GCGGTGGTCG AACGCATCGC CAACCGCGTC GCGGTGATGT ACCTCGGCCA AATTGTGGAA ATCGGCCCGC GCCAGTCGGT GTTTAACGAT CCGCAGCATC CGTATACCCG CCGCCTGTTG GCCTCGGTTC CGATTGCCGA TCCAACCCGT CGTGGTACAC GCCAGTTTGA CGACAGCGAA ATCCCCTCCC CCTTACGTAA AGCAGGTGAG GCCGTCGCCA AAACGCGCTA CCGCGAGGTT GCGCCGCAGC ACTGGGTTGC CGACAACGAA TCGGCTGCCT GA
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Protein sequence | MTDIMHAGAA TAPGNASRPV LEIDDLSVSF SGRSGTHQAL KGISFTVNKG EVVAVVGESG SGKSVTSLTV MGLLADSANI GHGAIRFTAR DDQQHDLLSM KAEARRKLRG RELAMIFQEP MTSLNPVLKV GDQLTEALLD HEICDAASAD KKARELLRKV RIADVDRVMK SYPHSLSGGM RQRVMIAQAL ACDPQLLIAD EPTTALDVTV QARILQILRD LQQQSDMAVL FITHDMGVVA EIADRVVVMY RGEIVEQGTV EQIFAAPQHP YTQSLLAAVP KLGDMRESLW PKRFPLLGQA ADPDNIEQVT ARYDAEPLLD IRGLRVYYPI RSGILSKVTH HVHAVEQIDF NVWPGETLAI VGESGCGKST TGRALLRLVQ SEAESIHFQG NEISQMKERD FQPLRREMQM VFQDPYASLN PRLTVGFTIA EPLLLHGLVK SLEEATPQVQ ALLKSVGLLP EHARRYPHEF SGGQRQRIAI ARAMALQPQV IIADEAVSAL DVSIQAQVVN LMMDLQKKTG VSWIFISHDM AVVERIANRV AVMYLGQIVE IGPRQSVFND PQHPYTRRLL ASVPIADPTR RGTRQFDDSE IPSPLRKAGE AVAKTRYREV APQHWVADNE SAA
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