Gene Pecwa_4253 details

Gene Information

• Locus tag: Pecwa_4253
• ID: 8532696
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4698560
• End bp: 4699273
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 48%
• Product: transcriptional regulator, GntR family
• Protein accession: YP_003261584
• Protein GI: 261823478

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.506804
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA AAGATTTCAT CGCGCAGGAC TTATTGAGCA AAATCTATCA GCACACCGAT 
CCGCTACCAG AAAAGTTACC TCCAGAACGC CAGTTGGCGG AAGAATACGG CGTGTCGCGC 
TTCACTATTC GTCAGGCGCT GGAAAAGCTT GCCAGTATCG GCGCAATCCA TATGGTGCAA 
GGTTCTGGTA ACTTTATTAA TCAGGGCGTG CGCAGTAACC CACTGGTTTA TAACTCGATT 
ACCGAAAAGA AATTTACTCA GATTTCATCT CGCCTGCTTA GCCTACATAA ACGACTGCCA 
AACCGAGAGG AACAGCAGGT CTTTGCTATC AGCGAAAATG CGTTCATCTG GGAGTTCAGC 
CGCTTACGTT ATGTTGATAA CCGCAAGGTA CAGATCGAGA TATCGAAGAT GCCTGCCGCA 
GACTTCCCAG AGATGAGTCA GAAGATTATC GAAGGCTCTA TTCAGCAGTA TGTGCTCAGC 
AAGGGCTATG CTATTTCACA CTACCTGACA CATTATCAGG CGGTTAACGT CACGAAAGCA 
CAGGCTGAGC TACTGGGGTG CAAGAAAGGT ACAGCGGCGA TGCATATTCT TAACCGCGGA 
ATTTTACAGG GCGGCCGCGT GTACGAATCG AGCGATATCA TCGATATAGA TTACACCTGT 
ACCTATGTCA TCCCCTTAAA TCTCGATAAC CTGGCCTTCC GCCAATCGCC GTAA 

 

Protein sequence

MKKKDFIAQD LLSKIYQHTD PLPEKLPPER QLAEEYGVSR FTIRQALEKL ASIGAIHMVQ 
GSGNFINQGV RSNPLVYNSI TEKKFTQISS RLLSLHKRLP NREEQQVFAI SENAFIWEFS 
RLRYVDNRKV QIEISKMPAA DFPEMSQKII EGSIQQYVLS KGYAISHYLT HYQAVNVTKA 
QAELLGCKKG TAAMHILNRG ILQGGRVYES SDIIDIDYTC TYVIPLNLDN LAFRQSP