| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4225 |
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| Symbol | |
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| ID | 8532662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 4661476 |
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| End bp | 4662303 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | transcriptional regulator HdfR |
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| Protein accession | YP_003261556 |
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| Protein GI | 261823450 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATACCG AATTACTAAA AACCTTTCTG GAAGTCAGTA GGACAAGACA CTTTGGCCGT
GCCGCCGAAT CCCTGTATCT GACGCAATCA GCGGTGAGTT TTCGGATTCG CCAGTTAGAG
ACGCAACTTG GTGCCAACCT GTTCACACGT CATCGGAACA ATATACGTCT GACCCCCGCT
GGCGAACGAC TTCTACCCTA TGCGGAAAGC CTTATCGGTA CCTGGCAGAT CGCCAAAAAA
GAGGTCGCAC GCTCTCAGCA ACACAGCCTG CTCTCGGTAG GAGCAACCGC TTCGTTATGG
GAGGTATATC TGACACCGTG GCTACAATCT CTCTACCAAC AGCGCCCATT GCTCCAGTTA
GAAGCGCGGA TTGCCTTGCG CCACTCGCTG GTAAAGCAAC TCCATGAACG TCAGTTGGAT
CTGTTGATTA CGACTGAACC ACCCAAAATG GAAGAATTGG CGAGCCAGCT ACTGGGCAAT
TTTTCCCTTT CGCTGTTTGC AGCAGAAGCG CACCCACCCG GACAGGAACT GCCCTATATC
AAACTTGAAT GGGGAGCTGA TTTTCATCAG CAGGAACATC GCCTGCTAGC CAACGAGCAA
CTTCCTGTCT TGACAACAAC ATCGGCCCAT TTAACCCGTC AGTTGCTTGA AACAACCGGC
GGTTGCGCGT TTTTACCTAG CCATTGGTTA CAAACGTACA CCAATCTGCA GATAGTCGGC
GACAGTCAGC CCGTCGTGCG TCCGTTTTAT GCCGTTTGGT TGCAAAATAG CGATCAACAG
ACAATGATCC GTCAGTTGTT GAAAACGCCT ATTTTAATAA ATGCATGA
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| Protein sequence | MDTELLKTFL EVSRTRHFGR AAESLYLTQS AVSFRIRQLE TQLGANLFTR HRNNIRLTPA
GERLLPYAES LIGTWQIAKK EVARSQQHSL LSVGATASLW EVYLTPWLQS LYQQRPLLQL
EARIALRHSL VKQLHERQLD LLITTEPPKM EELASQLLGN FSLSLFAAEA HPPGQELPYI
KLEWGADFHQ QEHRLLANEQ LPVLTTTSAH LTRQLLETTG GCAFLPSHWL QTYTNLQIVG
DSQPVVRPFY AVWLQNSDQQ TMIRQLLKTP ILINA
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