| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4196 |
|---|
| Symbol | |
|---|
| ID | 8532633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4624979 |
|---|
| End bp | 4626109 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
|---|
| Protein accession | YP_003261527 |
|---|
| Protein GI | 261823421 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.765825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCAT TTAATGCGCC ACCGGTTGTC GGTACGGAAC TGGACTATAT GCAGGCCGCC
ATGAGCAGCG GCAAATTGTG CGGCGATGGT GGGTTTACCC GCCGTTGTCA GCAGTGGCTG
GAACATTATT CCGGTAGTAA AAAAGTCCTG CTCACGCCGT CTTGTACCGC GTCGCTGGAA
ATGGCCGCTA TCCTGCTGGA CGTGAAGCCC GGCGATGAAG TGATCATGCC GAGCTATACC
TTCGTTTCTA CCGCCAATGC CTTTGTATTG CGCGGGGCGA AAATCGTGTT TGTCGATATC
CGTCCAGATA CGATGAACAT TGACGAAACG AAGATCGAAG CGGCAATTAC AGAAAAAACG
CGCATTATCG TGCCAGTTCA CTACGCGGGC GTCGCCTGCG AGATGGACGC GATTATGGCA
CTGGCGAAAA AATACGATTT ATATGTCGTG GAAGATGCGG CACAGGGCGT GATGTCCAGC
TACAAAGGCC GCGTTCTGGG CTCCATCGGC CACATCGGCT GCTTCAGTTT TCACGAAACC
AAGAACTACA CCTCGGGCGG AGAAGGCGGG GCCACGCTGA TTAATGACGC CAGGCTGGTG
GAGCGAGCGG AAATCGTTCG TGAAAAAGGC ACCAACCGTA GCCAGTTCTT CCGTGGGCAG
GTGGACAAAT ATACCTGGCG CGACATCGGC TCAAGCTATC TGATGGCGGA TATTCAGGCC
GCCTATCTCT GGGCACAGTT GGAAGCAGCG CGACCGATTA ATGAACGTCG CCTGAAACTG
TGGCAGAACT ACTACGCCGC ATTTAAATCG CTGGCCGACG CTGGGCGACT TACCCTACCG
ACCGTGCCTG CCAATGGGAT CCACAACGCG CACATGTTTT ATATCAAACT ACGCGATCAG
GACGACCGCA GTGCGTTTAT CAATTATATG AAAGAAGCCG AAATCATGAC GGTCTTTCAT
TATATCCCGC TACATAGTTG CCCGGCCGGC CTGAACTTCG GTCGTTTCTC CGGTGACGAT
CGCTACACCA CGCAGGAAAG CGAGCGGCTG GTACGTTTAC CACTGTTCTA CAACCTGTCG
GACGTCAATC AGCGTACCGT CATTAATACC ATTCTGAGCT TCTTCTCCTG A
|
|---|
| Protein sequence | MIPFNAPPVV GTELDYMQAA MSSGKLCGDG GFTRRCQQWL EHYSGSKKVL LTPSCTASLE
MAAILLDVKP GDEVIMPSYT FVSTANAFVL RGAKIVFVDI RPDTMNIDET KIEAAITEKT
RIIVPVHYAG VACEMDAIMA LAKKYDLYVV EDAAQGVMSS YKGRVLGSIG HIGCFSFHET
KNYTSGGEGG ATLINDARLV ERAEIVREKG TNRSQFFRGQ VDKYTWRDIG SSYLMADIQA
AYLWAQLEAA RPINERRLKL WQNYYAAFKS LADAGRLTLP TVPANGIHNA HMFYIKLRDQ
DDRSAFINYM KEAEIMTVFH YIPLHSCPAG LNFGRFSGDD RYTTQESERL VRLPLFYNLS
DVNQRTVINT ILSFFS
|
|---|
| |