Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4191 |
Symbol | |
ID | 8532624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4618734 |
End bp | 4619543 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003261522 |
Protein GI | 261823416 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAACAC GTTTCTTTAT TAAACCTAAA ACACTCTTGC TCGCAGCAGG GATCGCCGTC GTCGTAGCTG GGTGTGATAA TACGACCACT ACAGACCAGC CACAGGTTTT ACGCATTGGT ACTACCGGAC AAAGTTTTCC TGGTTCTTAT AAAGAAAACG GTAAACTCGT TGGCTATGAT GTAGAAGTCG CTGAAAAAAT AGCGAATGAA CTGGGCTATA AGGTCGAGTG GACAACGTCG GACTTCAGCG GTTTACTGGG GCAGTTAGAG GCAGGAAAAC TTGATACTAT CGCGAATAAT TTCGTCCAAA CCGAGGCTCG TCAGAAAAAA TACAATTTTT CTAAAGACTA CCTCACTTAT GCTTCACAGG TCGTCACAAG TATAAAAAAT GACGATATCC AGTCTTTATC CGATCTGGAC GGAAAAACGA TTGCTGGGGT TCTAGGCTCT ACACACGTCA CAAACCTGCG TAACGCTTTT CCCAAAAACA ATATTACCAT TAGAACCTAC GAGACCCGGG ATGGCGCAGT CAATGATGTC ATCAGTAACC GCGTACAGGG CTATGTCAAT TCACGCCCAA TTCTGCTAGC CGAAATCAAC AAACATAAAC TGCCACTCAA GTTGGTTGGG GAGCCGTTAT CTCATGAAAT CGTTAGTTTT CCGTTTGCGA AAAATCCAAA AGGCGACACC CTGCTCGCTG CTTTTAACGA AAAGCTCGAC ACATTGAGAA GCAACCATCA GTTGAACGAG CTGGCTGAAA AGTATTTCGG TAGCGATGAT GTGCTGGGGC ATGGATCCAA AGCTAAATAA
|
Protein sequence | MQTRFFIKPK TLLLAAGIAV VVAGCDNTTT TDQPQVLRIG TTGQSFPGSY KENGKLVGYD VEVAEKIANE LGYKVEWTTS DFSGLLGQLE AGKLDTIANN FVQTEARQKK YNFSKDYLTY ASQVVTSIKN DDIQSLSDLD GKTIAGVLGS THVTNLRNAF PKNNITIRTY ETRDGAVNDV ISNRVQGYVN SRPILLAEIN KHKLPLKLVG EPLSHEIVSF PFAKNPKGDT LLAAFNEKLD TLRSNHQLNE LAEKYFGSDD VLGHGSKAK
|
| |