| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4186 |
|---|
| Symbol | |
|---|
| ID | 8532619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4613087 |
|---|
| End bp | 4613878 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_003261517 |
|---|
| Protein GI | 261823411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AAGTAACGTT GTCTGTTCTG GCGCTGACGA CCGCCTTTCT TGTTGCCGGT
TGTGATTCTG GGAAGAGCGG CACCGAGCAG GAAAAAGTAT TGAAAGTGGG TTCAACGGGC
CAGAGTTATC CAAGTGGTTT TAAGCAGGAT AACAAGCTGG TCGGGTTTGA CGTTGAAGTC
ACGGAAACCA TCGCGAAGGA TTTGAACTAC AAAGTTGAGT GGGTTACCGC TGATTTCAGT
GGCCTGATGG GGCAATTGGA AGCGAAAAAG CTGGATACCG TGGCGAACGT GGTGGCAATT
ACCCCTGCAC GTCAGGAAAA ATACAATTTC GCCCAGCCGT ATAGCTTCTA CGGTAGCCAG
ATTGTGACGC ACAAAGATAA CACAGACATT AATACACTGG CCGACCTGAA AGGGAAGACG
GTTGCTGGCG TTCTGGGTTC TAACCACGTC AACAACCTGA AAAAAGCCTT TGCCGACGGC
AGCGTCACTA TTCGCACCTA TGAAACACGT GATGGTGCGA TGAACGATGC GCTGTCTAAA
CGCGTTGAAG GCTACGTGAA TTCACGTCCG ATCCTGCTGG CAGAAATCAA TAAGCGTAAC
CTTCCGTTTA AGCTGGTTGG TGAGCCGCTG GTGATTGAAG AGGTCAGCTT CCCGTTCCAC
AAAGACGAAA ATGGTGATGC ATTACGTAAA CAATTCGATG CTGAATTGAC GAAAATGCGT
GAAGATGGAC GCCTGAAAGC TCTCGCCGAA AAATACTTTG GTGAGGATAT CTCTGTTTCA
CCGAAAAAGT AA
|
|---|
| Protein sequence | MMKKVTLSVL ALTTAFLVAG CDSGKSGTEQ EKVLKVGSTG QSYPSGFKQD NKLVGFDVEV
TETIAKDLNY KVEWVTADFS GLMGQLEAKK LDTVANVVAI TPARQEKYNF AQPYSFYGSQ
IVTHKDNTDI NTLADLKGKT VAGVLGSNHV NNLKKAFADG SVTIRTYETR DGAMNDALSK
RVEGYVNSRP ILLAEINKRN LPFKLVGEPL VIEEVSFPFH KDENGDALRK QFDAELTKMR
EDGRLKALAE KYFGEDISVS PKK
|
|---|
| |