Gene Pecwa_4185 details

Gene Information

• Locus tag: Pecwa_4185
• ID: 8532618
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4612330
• End bp: 4613001
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 50%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003261516
• Protein GI: 261823410

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGTCG ATCTTGCCTA CCTGCTGAAG GTCTTTCCCC AGGTATTAAT GTATTTGCCG 
ACCACGCTGT TCCTTGCCGT GGTGTCGATG TTTTTTGCTA TGGTTCTCGG CCTTATCCTG 
GCGTTAGTCC GTGAAAGCAA GATCGTCGCG GTAGTAAAAA TTGTCGAACT GTATATTTCC 
CTGTTCCGCG GTATTCCGTC GCTGGTTCAA TTGTTTATTA TCTATTTCGG CCTACCGCAG 
CTATTTCCAA GCTTATCCAA TCTGGATGCG ATGACGGCCG CGATTATTGG TTTTAGCCTG 
AAAACCTCCG CCTATATGGC TGAGATTTTC CGTGCAGGCC TGGCCTCGGT GGATTTCGGC 
CAGACGGAAG CGGGTCTGTC CATTGGCATG AGTAAAGCGC AGGTCTATCG CCGCATCGTG 
TTGCCTCAGG CCATGCTGAA TGCGCTGCCA GCGACGGGGA ACACCTTTAT TTCCCTGATT 
AAAGATACTT CGGTGGCCTT TGCGCTGGGT GTCTCCGAAC TGTTCGCGGA AGGCAAGATG 
ATTGCCGCTG AATCTCTGCG TTTCTTTGAG ACCTTCCTGG TCGTGGGTCT GATTTACTGG 
ATGGTGATTG TGGTTTACGC CTGGCTGCAA AAACAGCTTG AGAAGAAACT GAATCACTCG 
CTACAGCGAT AA 

 

Protein sequence

MNVDLAYLLK VFPQVLMYLP TTLFLAVVSM FFAMVLGLIL ALVRESKIVA VVKIVELYIS 
LFRGIPSLVQ LFIIYFGLPQ LFPSLSNLDA MTAAIIGFSL KTSAYMAEIF RAGLASVDFG 
QTEAGLSIGM SKAQVYRRIV LPQAMLNALP ATGNTFISLI KDTSVAFALG VSELFAEGKM 
IAAESLRFFE TFLVVGLIYW MVIVVYAWLQ KQLEKKLNHS LQR