Gene Pecwa_4175 details

Gene Information

• Locus tag: Pecwa_4175
• ID: 8532608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4601073
• End bp: 4601723
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 53%
• Product: transcriptional regulator, GntR family
• Protein accession: YP_003261506
• Protein GI: 261823400

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.454993
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTAA CACTTAACGA CAAAGAGCTG GCGTTGTCGC CGTTCGAGAT ACTGATTAGC 
GCAATCGAGA AAGGTGAACT GTTGCCTGGC GAACGTTTGC AGGAAACACG GTTGGCGCAG 
CAATTTGGGC TCAGCCGCAC GCCGATTCGT GAGGCGCTGC ACCGGCTTGA AGCGCTAGGA 
TTGGTGGAAC CGGGCCCTCA GCGCGGGCTG ATGATTGCTC AGATCAGCTA TGAGCGACTG 
CGTCAGCTTT TCGCCGTGCG TGAAGGGTTG GAACGGTTGG CGATGGAACT GGCCGTGGCA 
TCTGCTTCAA CGGAAGAACT GGAGCTGTTG CAGGATATGG TTAAAGTGGA GAAAACGCTT 
ACTGACAGTC GGCAATTGCA CGATCACAAC CGTCTTTTTC ACCGGCAGAT TTATCGAGCG 
ACCCATAATC CGTATCTAAA TGAAATGCTG GAAAATTTGC GTATTCATCT GTCGCTACTG 
CGCGGAACCA CCTATGAGTC GCCGGAGCGT ACCGAAGAGG CGAGGCGTGA ACACCAGGCG 
ATTGTGGAAG CGTTAGTTCG GCGTGATAAG GATGCGGCAC AAGAGGCTGC CTGCCAGCAT 
ATTCGTAACG GCTATCGCGC CCGGTTAAGC ATGTTGAATC AACAGCTTTG A 

 

Protein sequence

MNLTLNDKEL ALSPFEILIS AIEKGELLPG ERLQETRLAQ QFGLSRTPIR EALHRLEALG 
LVEPGPQRGL MIAQISYERL RQLFAVREGL ERLAMELAVA SASTEELELL QDMVKVEKTL 
TDSRQLHDHN RLFHRQIYRA THNPYLNEML ENLRIHLSLL RGTTYESPER TEEARREHQA 
IVEALVRRDK DAAQEAACQH IRNGYRARLS MLNQQL