Gene Pecwa_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_4172 
SymbolhemD 
ID8532605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp4597404 
End bp4598144 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID 
Producturoporphyrinogen-III synthase 
Protein accessionYP_003261503 
Protein GI261823397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0344779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTC TGGTTACCCG TCCGTCACCC ACTGGCGAAC AACTGGTGAC CCGTTTAAGA 
AAGCTCGGCT ACCACGCCTG GCACAGCCCG CTGATCGAGT TTTCGCCTGG ACGAGAACTC 
GCTGGTCTGC CTGCGCAATT ACAAGCCCTA CACACCGACG ACCTGGTGTT TGCGCTCTCA 
CAACACGCGA TTCATTACGC CGATCCCATG CTGACGCGCA CGGGCACAAG CTGGCCTGCC 
CACCTCGCTT ATTATGCCAT TGGCCGCACG ACGGCACTGG CTTTACATAA AATCAGCGCA 
CACCCTGTCG CCTATCCGCC TGAACGTGAA ACCAGCGAAA CGCTATTGCA ACTTCCTGAG 
TTACAAGATG TTGCAGGGAA ACGAGCGCTA TTACTGCGCG GCAACGGCGG AAGGGAGCTA 
CTGGGTGAAA CGTTGACTGA GCGGGGCGCA CAGGTAACCT ACTGTGAATG CTATCAGCGC 
CGAGATGTTC ACTATGATGG CTCGGAACAA AGCCGCCACT GGCAGCAAAT AGGCATCGAC 
AAACTGGTGA TTACCAGCGG AGAAATGCTA CAACGGATCT ATACTTTAGT ACCTGATTAC 
TATCGGGCTT CCTGGTTACT TGGCTGCCAG TTGATCGTCG TTAGCGAACG ACTGGCAGAA 
CAAGCGCGTC AGCTCGGCTG GCATGATATC CGGGTGGCCG ATAACGCTGA TAACGATGCG 
CTCGTGCGCG CACTACAATA A
 
Protein sequence
MTILVTRPSP TGEQLVTRLR KLGYHAWHSP LIEFSPGREL AGLPAQLQAL HTDDLVFALS 
QHAIHYADPM LTRTGTSWPA HLAYYAIGRT TALALHKISA HPVAYPPERE TSETLLQLPE 
LQDVAGKRAL LLRGNGGREL LGETLTERGA QVTYCECYQR RDVHYDGSEQ SRHWQQIGID 
KLVITSGEML QRIYTLVPDY YRASWLLGCQ LIVVSERLAE QARQLGWHDI RVADNADNDA 
LVRALQ