| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4166 |
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| Symbol | dapF |
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| ID | 8532599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 4590725 |
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| End bp | 4591549 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003261497 |
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| Protein GI | 261823391 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.078673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTCG CTAAGATGCA CGGATTAGGC AACGATTTCA TGGTTGTTGA TGCCGTTACG
CAAAACGTTT ATTTTTCACC CGAACTGATT CGTCGTTTGG CGGATCGGCA CTGTGGTGTG
GGTTTCGACC AACTGTTGGT GGTCGAGCCG CCCTACGATC CTGAACTGGA TTTTCATTAC
CGTATTTTTA ACGCGGATGG TAGTGAAGTG GCGCAGTGCG GTAATGGCGC GCGCTGTTTT
GCCCGCTTTG TGCGCCTGAA AGGGCTGACC AACAAGCGTG ATATCGCCGT GAGTACGCAG
ACTGGCCGGA TGGTGCTGTC TGTGACGGAC GATGAACTGG TGCGCGTTAA TATGGGTGAG
CCGAATTTCG AGCCGCAACA GGTGCCTTTT CGCGCAGTCA AAGCGGAGAA AACTTACATC
ATGCGTGCCG ACGAACACAC GGTACTTTGT GGCGTGGTGT CGATGGGCAA CCCGCACTGT
GTGATTCAGG TTGACGACGT GGAAACGGCG AAGGTGGAAA CGCTGGGGCC GTTGCTGGAA
AGTCACGAGC GCTTTCCTGA GCGTGCCAAC ATCGGTTTTA TGCAGATCGT CGATAGCCAG
ACTGTCCGTC TGCGGGTGTA CGAACGCGGT GCGGGAGAAA CGCAGGCGTG CGGTAGCGGC
GCGTGCGCTG CTGTGGCGGT CGGTATCCTG CAGGGGTCAT TGTCCGCGAA AGTTCGCGTA
TCGCTGCCGG GCGGGGAGTT GGATATTCAG TGGGATGGGC CGGGACATCC GTTATTCATG
ACCGGGCCAG CAACGCATGT CTACGATGGA TTTATTCATT TATGA
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| Protein sequence | MQFAKMHGLG NDFMVVDAVT QNVYFSPELI RRLADRHCGV GFDQLLVVEP PYDPELDFHY
RIFNADGSEV AQCGNGARCF ARFVRLKGLT NKRDIAVSTQ TGRMVLSVTD DELVRVNMGE
PNFEPQQVPF RAVKAEKTYI MRADEHTVLC GVVSMGNPHC VIQVDDVETA KVETLGPLLE
SHERFPERAN IGFMQIVDSQ TVRLRVYERG AGETQACGSG ACAAVAVGIL QGSLSAKVRV
SLPGGELDIQ WDGPGHPLFM TGPATHVYDG FIHL
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