| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4143 |
|---|
| Symbol | |
|---|
| ID | 8532576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4566160 |
|---|
| End bp | 4566855 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Pirin domain protein |
|---|
| Protein accession | YP_003261476 |
|---|
| Protein GI | 261823370 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATT TACGTCAAGC GCAAGATCGC GGACATGCTA ATCACGGCTG GCTCGACAGT
TGGCACACGT TCTCATTTGC CGATTATTAC GATCCTGATT TCATGGGATT CTCAGCACTG
CGCGTGATTA ATGAAGACTT TATTGAAGGT GGTCAGGGTT TCGGCACGCA TCCGCATAAA
GATATGGAAA TTCTGACCTA TGTCTTGTCC GGTGCGGTTG AGCATCAGGA CAGCATGGGA
AATAAAGAGC AGGTGCCAGC GGGCGAATTC CAGATTATGA GCGCGGGAAC GGGCATTCGT
CATTCTGAAT ATAACGCCAG CAAGGACGAA CAACTGCACC TGTATCAAAT TTGGATTATC
CCGGAAAAAA CCGGGCTGAC GCCGCGCTAC GAGCAGAAGC GTTTTGATGT GCTTCAGGGG
CGTCAACTTG TGCTGTCCCC GGATGCGCGT GAAGGTTCGC TGAAAGTTTT TCAGGACATG
ACGCTATGGC GCTGGGCACT GAAAGCGCAG GAACAATCGG TGTATCAGAT TCAGGCTGAC
CGTCGCGTTT GGGTTCAAGT GGTACGCGGC AGTGTAGAGA TTAACGGCCA GAAAGCGGAA
ACCAGCGATG CATTTGCGGT TTGGGATGAA ACGGCGATTT CCGTACACGC CAGCGCAGAC
AGCGAAATTC TGCTGTTTGA TTTGCCGCCG GTATAA
|
|---|
| Protein sequence | MIYLRQAQDR GHANHGWLDS WHTFSFADYY DPDFMGFSAL RVINEDFIEG GQGFGTHPHK
DMEILTYVLS GAVEHQDSMG NKEQVPAGEF QIMSAGTGIR HSEYNASKDE QLHLYQIWII
PEKTGLTPRY EQKRFDVLQG RQLVLSPDAR EGSLKVFQDM TLWRWALKAQ EQSVYQIQAD
RRVWVQVVRG SVEINGQKAE TSDAFAVWDE TAISVHASAD SEILLFDLPP V
|
|---|
| |