Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4129 |
Symbol | glpD |
ID | 8532562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4547010 |
End bp | 4548512 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_003261464 |
Protein GI | 261823358 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.199856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAACCA AAGATCTCAT CGTTATCGGC GGCGGAATTA ACGGTGCAGG CATCGCCGCA GATGCGGCTG GGCGGGGTTT ATCAGTCCTG TTGTTGGAAG CGCAGGATCT CGCCTGTGCC ACGTCCTCCG CCAGCTCCAA GCTGATTCAC GGTGGCCTGC GTTACCTTGA GCACTATGAG TTTCGTTTGG TCAGCGAAGC GCTGTCTGAG CGTGAAACGC TGCTGAAAAT GGCACCGCAC ATTATTTTCC CGATGCGCTT TCGTTTGCCC CATCAGCCAC ACCTGCGTCC GGCCTGGATG ATTCGTATCG GCCTGTTCAT GTATGACAAC ATTGGCAAAC GCGTTAGCCT GCCTGCCAGT AAGGGACTGA AATTCGGCGC AGATTCGGTT CTTAAACCTG AACTGAAGCA AGGCTTTGAA TATTCGGACT GCTGGGTGGA CGATGCGCGT CTGGTGGTGT TAAACGCGCA GGAAGTGACA AAACGTGGTG GAGAAGTCCG TACCCGTACC AAAGTTACCC GCGCTCGCCG TGAACAAGGC GTGTGGATTG TGGATGCCGT TGATTCACTG ACCGGCGAAA CCTTTACCTG GCGCGCCAAA GGTTTAGTAA ACGCAACCGG CCCGTGGGTG AAGGAATTCT TTGATGACGG CCTGCAACTG AAATCGCCTT ACGGCATCCG TTTGATCAAA GGCAGCCACA TCGTGGTGCC AAAAGTCCAC AACCAGCCGC AAGCGTATAT CCTGCAAAAC AAAGATCACC GTATTGTGTT CGTGATCCCG TGGCAGGACG ATTATTCGAT CATCGGCACC ACTGACGTGG AATACAAAGG TAATCCGCAC GATGTGAAGA TCGATGACAA CGAAGTCGGT TATCTGCTGG ATGTGTATAA CGACCACTTC AAACAGCAAC TCACGCGTGA CGATATCGTC TGGACATATT CCGGCGTGCG TCCGCTGTGT GATGACGAAT CTGATTCTCC ACAGGCGATT ACGCGTGATT ACACCCTGTC AGTGGATGAT GACAACGGTC AGGCTCCGTT GCTTTCCGTG TTTGGCGGCA AGCTGACGAC ATACCGTAAG CTAGCAGAGC ACGCGCTGGA CAAGTTGCAC AAATACTATC CGCAGGCAGG CAAAGCCTGG ACAAAAGGTG CGGTACTGCC GGGTGGTGAT ATCGCTGGCA CACGTGATGA CTACGCTGCT GCGCTGCGTC GCCGTTTTAA TCTGCCTGAA TCACTAACGC GCCGTTACAG CCGTACCTAT GGTTCAAACA GCGAACTCAT TCTGGCAAAC GTGAAAAGCC TCAGCGATAT GGGTGAAGAT TTCGGTCATG ACCTGTATGA AGTGGAACTG CGCTATCTGA TCGAGAAAGA ATGGGCTGTC ACGCTGGACG ACGTCATCTG GCGTCGCACC AAACTGGGCA TGCGCTTTGA TGACGCACAG AAACAGCGCA TCAGCGACTG GTTAGCCAGC CACCGCCAAC AGCAGATGGC AAAAGCGGGT TAA
|
Protein sequence | METKDLIVIG GGINGAGIAA DAAGRGLSVL LLEAQDLACA TSSASSKLIH GGLRYLEHYE FRLVSEALSE RETLLKMAPH IIFPMRFRLP HQPHLRPAWM IRIGLFMYDN IGKRVSLPAS KGLKFGADSV LKPELKQGFE YSDCWVDDAR LVVLNAQEVT KRGGEVRTRT KVTRARREQG VWIVDAVDSL TGETFTWRAK GLVNATGPWV KEFFDDGLQL KSPYGIRLIK GSHIVVPKVH NQPQAYILQN KDHRIVFVIP WQDDYSIIGT TDVEYKGNPH DVKIDDNEVG YLLDVYNDHF KQQLTRDDIV WTYSGVRPLC DDESDSPQAI TRDYTLSVDD DNGQAPLLSV FGGKLTTYRK LAEHALDKLH KYYPQAGKAW TKGAVLPGGD IAGTRDDYAA ALRRRFNLPE SLTRRYSRTY GSNSELILAN VKSLSDMGED FGHDLYEVEL RYLIEKEWAV TLDDVIWRRT KLGMRFDDAQ KQRISDWLAS HRQQQMAKAG
|
| |