Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4127 |
Symbol | |
ID | 8532560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4545026 |
End bp | 4546324 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003261462 |
Protein GI | 261823356 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.560354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGA CAACTGCCTC ATCTACACCT GCTGCTGTAA CGCAACCTTC GCAGAAAATA TCTCGTCTGC GTTGGAATAT TATTTTCATA TTACTGATTG CTGCCGTGGT GAATTATCTT GACCGCGCCA ATCTCAGTAT CGCCAACACC ACCATTTCAA AAGAGTTTGG TTTCAGTTCC ACACAGATGG GGCTCCTGCT CTCCGCATTC TTATGGCCTT ATGCCATCGC TAACCTGCCT GCTGGCTGGC TGGTCGATAA ATTTGGTCCG AAAAAAATGT TCTCCTGGGC TCTCGGCCTC TGGTCTGGGT TCACTATTCT AGCCGGGTTC GTCAATGGCT ACGCCATGTT CTATGGCCTG CGTATGTTAC TCGGGGTGTC TGAATCCCCG TTCTTCACCT CCGGGATTAA AATCACCCAC CGTTGGTTCC CAAGCAATGA ACGCGGCTTA CCTACCGCTA TCATCAACAC GGGCTCGCAA ATCGCCAACG CCATTGCGCC ACCGATTTTG ACCATTCTGC TGTTAACCAT GGGCTGGCGT GGCATGTTTA TCGCTATTGG TCTGGCTGGT ATTCCGCTCC TGCTGGTCTG GATGAAGCTC TATCGTAACC CGACGCCACA GGAAGAAGTT GAAATCCATG GCCCTGTCGA AGCCACGGAA ACGCAAAAAC CAGACGCGCC AAAAGCAAGC TGGGGCTCTC TGTTCAAGCA CAAGACGACC TGGTTCATGA TTCTGGGCAA TTTCTCCATC ATGTTTACCA TTTGGGTCTA TCTCACCTGG CTGCCTAGTT ATCTGGAACG TTCTCTTGGA TTCAGCTTGA TGAAAACAGG TTGGGTCGCC TCTATTCCGT TCATGGCCGG CATTTTGGGC GTGCTGTGTG GTGGGATAAT TTCGGACCGT CTGATTCGTC GCGGCACCAA CACCATTACC GCGCGCAAGA TCCCCATTGT ATGCGGTGCC GCTCTCGCTG CATGTTGCGT AGCTCCCGTG CCGTTCGTCA CTGATACAAC ATTATGTATC GCGCTGCTTT CCCTGGGATA TTTCTTTTCT CAGATGCCTT CTGGCGTGAT CTGGACACTC GCAACCGATA TCGCCCCGAA AACACAGGTT GCCTCCCTTG GTGCCATCCA GAACTTCGGC GGTTTCCTCG GCGCGGCCAG TGCCCCCATC GTCACAGGTA TCATTCTGGA TATGACGGGC GCGTTTACCA ACGTGTTTAT CTTCGGTGCC AGTTTACTTA TGCTAGGTGC TATCAGCTAC GGCGTATTTG TCAAAAAGCC GTTACCGGCT GAACAATAA
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Protein sequence | MKQTTASSTP AAVTQPSQKI SRLRWNIIFI LLIAAVVNYL DRANLSIANT TISKEFGFSS TQMGLLLSAF LWPYAIANLP AGWLVDKFGP KKMFSWALGL WSGFTILAGF VNGYAMFYGL RMLLGVSESP FFTSGIKITH RWFPSNERGL PTAIINTGSQ IANAIAPPIL TILLLTMGWR GMFIAIGLAG IPLLLVWMKL YRNPTPQEEV EIHGPVEATE TQKPDAPKAS WGSLFKHKTT WFMILGNFSI MFTIWVYLTW LPSYLERSLG FSLMKTGWVA SIPFMAGILG VLCGGIISDR LIRRGTNTIT ARKIPIVCGA ALAACCVAPV PFVTDTTLCI ALLSLGYFFS QMPSGVIWTL ATDIAPKTQV ASLGAIQNFG GFLGAASAPI VTGIILDMTG AFTNVFIFGA SLLMLGAISY GVFVKKPLPA EQ
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