Gene Pecwa_4122 details

Gene Information

• Locus tag: Pecwa_4122
• ID: 8532555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4540456
• End bp: 4541214
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 51%
• Product: DNA-binding transcriptional repressor GlpR
• Protein accession: YP_003261457
• Protein GI: 261823351

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGCAGA CACAACGGCA TGACGCCATT ATTGAACTGG TGCGTCGGCA GGGGTATGTC 
AGTACTGAAG AACTGGTGGA TCATTTTGCA GTGAGCCCGC AAACCATCCG TCGCGATTTG 
AACGATCTGG CTGAGCAAAA TAAAATCCAT CGCCACCACG GCGGCGCGGC ATTGCCATCC 
AGCTCGGTGA ACACGGCTTA TCACGATCGT AAAATGATGT GGTCGGATGA AAAGGCACGT 
ATTGCCCGTC GGGTGGCGAG CCAGATTCCA GACGGTGCGA CCTTGTTTAT CGATATCGGC 
ACCACGCCTG AGGCGGTGGC CTATGCGTTG ATGCAGCATA AGGATCTGCG CGTGGTCACC 
AATAATCTGA ACGTGGCAAC GCTGCTAACG GCAAAAGAGG ATTTTCGCCT GATTTTGGCT 
GGTGGCGAAG TTCGCACCCG CGATGGCGGT ATTATGGGTG AGGCGACGCT CGATTTTATC 
TCTCAGTTCC GTCTGGATTT TGGCATTTTG GGCATCAGCG GTATTGACAT GGATGGGTCA 
TTACTGGAGT TTGATTACCA TGAAGTGCGC ACAAAACGGG CGATTATTGA AAATTCTCGC 
TGTGTGATGC TGGTGACGGA TCATTCCAAG TTTGGCCGTA ATGCGATGGT GAATTTGGGC 
AACATGGATT TGATCGACTA TCTTTTTACC GATCAGTCAC CCCCACCCAG CGTACTGAAA 
ATTATTGAAC AACATAAGGT ACAGTTGGAG TTGTGTTGA 

 

Protein sequence

MKQTQRHDAI IELVRRQGYV STEELVDHFA VSPQTIRRDL NDLAEQNKIH RHHGGAALPS 
SSVNTAYHDR KMMWSDEKAR IARRVASQIP DGATLFIDIG TTPEAVAYAL MQHKDLRVVT 
NNLNVATLLT AKEDFRLILA GGEVRTRDGG IMGEATLDFI SQFRLDFGIL GISGIDMDGS 
LLEFDYHEVR TKRAIIENSR CVMLVTDHSK FGRNAMVNLG NMDLIDYLFT DQSPPPSVLK 
IIEQHKVQLE LC