Gene Pecwa_4120 details

Gene Information

• Locus tag: Pecwa_4120
• Symbol: malQ
• ID: 8532553
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4535794
• End bp: 4537878
• Gene Length: 2085 bp
• Protein Length: 694 aa
• Translation table: 11
• GC content: 57%
• Product: 4-alpha-glucanotransferase
• Protein accession: YP_003261455
• Protein GI: 261823349

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAAGG TGGATAAACT GGCAAGCCAG CAGACCGGCA TCGCGGAAAG CTATACCGAT 
GCCTATGGCA AAAAGCACAT TGTTGCGGCC GCAGTCAGAA ACCGGATTCA GGCAATGATG 
GACGTTTCTG ATAGCGGTAA TGCGCCCCTG CCGCCTGTTC GTGTCTTCTT GCAAGGCCGA 
GAGGCGGTCA TCGAGCTTGC TGGTCACGGT GAATTCTTCT GGACGCTGAT GTATGAAAAC 
GGCGGTCAAA TTCAAGGGCA GATAACCGGT GGTTCAACGC TGGCTTTGCC GGGCGTGCTG 
CCGCTGGGCT ACCACTACCT GACGTTGACG CAGGCCGACC AGCGCTGGAG CTGCCGGATT 
ATTGTTGCAC CGCATCGCTG CTATGAACCC GAAGCTTTAC AGCAGGGAAA ACGCTGGTGG 
GGCGTGACCG TACAGCTTTA CACCTTGCGT TCGCAGAACA ATTGGGGCGT AGGGGATTTT 
GGCGATCTGC GCCAACTGGT AGAACAGATT GCCCGACGCG GTGGCGCCTT TGTGGGGCTG 
AACCCACTGC ATTCGCTGTA CCCGGCGTTG GCAGAGGCGG CGAGCCCTTA CAGTCCGTCG 
TCCCGCCACT GGCTGAATAT TATTTATATC GATGTTAATC GGATTGATGA TTTCCAACAG 
AGCGGGGAAG CGCAGGCGTG GTGGCATCGT GAGGAGACGC AAAGTGCGAT CGCAGCGTTG 
CGGGCGGGGC GCTGGGTTGA TTATGAGCCG GTGACGCAGC TTAAGTTAGC TGCTCTGCGG 
CTGGCGTTTC GCTATTTTAC GACCCGTAGC GCGCTGGACC CGCGCATTAG TGCATTTCGT 
CAGTTTGTCG TCAGCGGCGG GCAGAGCCTG CAACTTCAGG CGACGTTTGA TGCGTTGCAG 
ACCTACCTGA AAAAACAGGG CGAGAATTAT GCGGACTGGC ATCAATGGCC TGCCAGTTAT 
CATGATGTAC ACAGTGAGAC CGTAAAAGCC TTTCGCCGTG AAAACAGCGA TGAGATTACA 
TTCTACAGTT GGCTGCAATG GGTGGCGCAT GAGCAATTAG CAGACTGCTA CGCGCATAGT 
AAACAGCTTG GTTTACCGTT AGGTTTATAT CGCGATTTGG CCGTCGGGGT CGCACGGGGC 
GGCGCAGAAA CCTGGGACGA ACGACAGCTA TATTGTCTCG ATGCTTCTAT CGGCGCACCG 
CCCGATCCGC TCGGGCCACA GGGACAAAAC TGGCAACTTG CGCCGATGAA CCCCACCATG 
ATGCAGCTTC GGGGTTATCA ACCGTTTATC GACGTGCTGC GCAGCAACAT GGCGCACTGC 
GGCGCGTTGC GTATCGATCA TGTAATGGCG CTCTTGCGCC TGTGGTGGAT ACCGAAGGCG 
GAGCCAGCGG GCAACGGGGC CTACGTGCAT TATCCGGTCG ACGATCTGCT GGCGGTGCTG 
GCGCTGGAAA GCCAGCGTCA TCGCTGCCTG ATTATCGGTG AGGATTTAGG CACGGTGCCG 
CCGGAAATTG TCAGCAAACT GCATGATTAC GGTATCTATT CTTACAAGGT GCTGTTCTTT 
GAAAAGGATG CAGAGGACCA CTTTCGCCCG CCCGAGGATT ACCCGCGTCA GGCGATGGCA 
ACCATTACCA CTCACGACCT TCCGACGCTG CGCGGCTACT GGCAAACCGT GGATTTATCG 
CTTGGGCGCG AGTTAGGGTT GTATCCTGTA GAGGCGTTGT TGCAAGAGCA GATGCTACAG 
CGTGAAAAAG CGAAACAGGG GCTGCTCAAC GCATTACACC ATTACGGGCT GCTGCCACAG 
CGTGTTGGCC GTAACTCGGC GCTGACGACA ATGGGCGCAC CGCTGAGCCG TGGCGTTCAC 
CGCTATGTCG CCGATAGCGC CAGCGCACTG GTCGGGTTTC AACTGGAAGA CTGGTTGGAT 
ATGGCCACGC CGGTGAATGT ACCGGGCACC AACCGCGAAT ACCCTAACTG GCGACGCAAG 
CTGACGCGTC CGCTGGAATC GATCTTCGCT GACCGCTGCC TTGAACGACT GGTTCGGGAT 
GTGGATTTGC GCCGCGGTGC GCCGATGAAA ACACAAAAAG CCTAA 

 

Protein sequence

MFKVDKLASQ QTGIAESYTD AYGKKHIVAA AVRNRIQAMM DVSDSGNAPL PPVRVFLQGR 
EAVIELAGHG EFFWTLMYEN GGQIQGQITG GSTLALPGVL PLGYHYLTLT QADQRWSCRI 
IVAPHRCYEP EALQQGKRWW GVTVQLYTLR SQNNWGVGDF GDLRQLVEQI ARRGGAFVGL 
NPLHSLYPAL AEAASPYSPS SRHWLNIIYI DVNRIDDFQQ SGEAQAWWHR EETQSAIAAL 
RAGRWVDYEP VTQLKLAALR LAFRYFTTRS ALDPRISAFR QFVVSGGQSL QLQATFDALQ 
TYLKKQGENY ADWHQWPASY HDVHSETVKA FRRENSDEIT FYSWLQWVAH EQLADCYAHS 
KQLGLPLGLY RDLAVGVARG GAETWDERQL YCLDASIGAP PDPLGPQGQN WQLAPMNPTM 
MQLRGYQPFI DVLRSNMAHC GALRIDHVMA LLRLWWIPKA EPAGNGAYVH YPVDDLLAVL 
ALESQRHRCL IIGEDLGTVP PEIVSKLHDY GIYSYKVLFF EKDAEDHFRP PEDYPRQAMA 
TITTHDLPTL RGYWQTVDLS LGRELGLYPV EALLQEQMLQ REKAKQGLLN ALHHYGLLPQ 
RVGRNSALTT MGAPLSRGVH RYVADSASAL VGFQLEDWLD MATPVNVPGT NREYPNWRRK 
LTRPLESIFA DRCLERLVRD VDLRRGAPMK TQKA