Gene Pecwa_4117 details

Gene Information

• Locus tag: Pecwa_4117
• ID: 8532550
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4533572
• End bp: 4534339
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 60%
• Product: bioH protein
• Protein accession: YP_003261452
• Protein GI: 261823346

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGCGT TGTATTGGCA GACCGAAGGC GCAGGAAATA CGGATCTTGT GTTGCTGCAC 
GGATGGGGAT TGAATGCGCA GGTATGGCAG AACATGGTCG TGCGACTCGC TCCGCATTTT 
CGCCTGCATC TGGTCGATCT GCCGGGCTAT GGCAGAAGCC AGGGATTCGG GCCGATGTCC 
CTGAATGACA TGGCGGACAG CGTGCTGGCG CAGGCACCGG ACTGCGCTGT CTGGCTGGGG 
TGGTCGCTCG GTGGACTGGT TGCCAGCCAA ATTGCGCTAA GCGCCCCTGC TCGGGTGGAC 
AAGCTGATTA CCGTGGCGTC ATCGCCCTGT TTCAGCGCAC AGGGTCGCTG GCCGGGCATC 
AAGCCAGACG TATTGCAGGG CTTTCAACAG CAGCTCAGCG AAGATTTCCA GCGCACGGTC 
GAGCGGTTTC TGGCGCTGCA AACGCTGGGA ACGGAGAGCG CACGGCAGGA TGCCCGATTG 
CTAAAAAGCG TGGTGTTGGA ACAGCCGATG CCGTCAGTCG AGGTATTGAA CGGTGGGCTG 
GAAATTCTGC GGGAAGCCGA TTTACGCCAG CCGTTAGCCG ACGTGACTGT GCCGTTTCTG 
CGGCTCTATG GTGCGTTAGA TGGGCTGGTG CCGCGCAAAG TTGCTGGACT GCTGGAGGAA 
CAATGGCCGA ACTCCACGTC GGTGGTGATG CCAAAGGCCG CGCATGCGCC GTTTATCTCG 
CACCCGGATG CCTTTTCCGA ACAGATAATC GCGTTCGCTC AGGCGTAA 

 

Protein sequence

MAALYWQTEG AGNTDLVLLH GWGLNAQVWQ NMVVRLAPHF RLHLVDLPGY GRSQGFGPMS 
LNDMADSVLA QAPDCAVWLG WSLGGLVASQ IALSAPARVD KLITVASSPC FSAQGRWPGI 
KPDVLQGFQQ QLSEDFQRTV ERFLALQTLG TESARQDARL LKSVVLEQPM PSVEVLNGGL 
EILREADLRQ PLADVTVPFL RLYGALDGLV PRKVAGLLEE QWPNSTSVVM PKAAHAPFIS 
HPDAFSEQII AFAQA