Gene Pecwa_4112 details

Gene Information

• Locus tag: Pecwa_4112
• ID: 8532545
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4526316
• End bp: 4527008
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 58%
• Product: ABC transporter related protein
• Protein accession: YP_003261447
• Protein GI: 261823341

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.39261
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAGT TATTGATTCA ACACCTGAGT GTGACCTTCC CTGACACCTC AGAGGCCGTG 
CTGGATATTC CCGCGTTGTC GATTCGTTCC GGCGAGCGCG TGGCGGTGAT GGGGCCTTCT 
GGCTCCGGTA AGACCACGCT GGTGAATGCT ATCACTGGCA TGGATCACAG CGGGACGGGT 
CAGGTGCAGT GGGAAAAGCA GGATATCTGG CAGTTGAACG AAGCGGAACG TGACCGCTGG 
CGGGCACAGC ATATCGGGCT GGTGATGCAG GACTTCCATC TTTTCCCTGG CCTGAATGCC 
ATAGAGAACG TCTTGTTGCC CGCACAGTTT CACCACTGGC GGATACCGGC ATCGCTCAGG 
CAACGGGCGG TAGATTTGCT GGCTCAGGTA GGGTTGGATA CGGGGAAACG CCCGATTGAG 
GTGTTATCAC GCGGCGAGAA GCAACGGGTT GCGGTAGCAA GAGCCTTGCT CAGCAAGCCG 
GACATCATCG TCGCCGATGA GCCAACTGCC AGTCTGGATG CGCAGAGCGG TGAGCAGATT 
GCTGACCTGC TGGTGACGCT GGCGCGCGAG AGTCGTGCAA CGCTTATCGC TATTACGCAC 
GATGCGCGTC TGGCTTCACA AATGTCGCGC TGTATTCAAC TGGAAAAAGG ACGCCTCGTG 
GCGGACAAGC CCTATCAGGA GGATCGTGCA TGA 

 

Protein sequence

MAELLIQHLS VTFPDTSEAV LDIPALSIRS GERVAVMGPS GSGKTTLVNA ITGMDHSGTG 
QVQWEKQDIW QLNEAERDRW RAQHIGLVMQ DFHLFPGLNA IENVLLPAQF HHWRIPASLR 
QRAVDLLAQV GLDTGKRPIE VLSRGEKQRV AVARALLSKP DIIVADEPTA SLDAQSGEQI 
ADLLVTLARE SRATLIAITH DARLASQMSR CIQLEKGRLV ADKPYQEDRA