Gene Pecwa_4105 details

Gene Information

• Locus tag: Pecwa_4105
• ID: 8532538
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4519745
• End bp: 4520533
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 44%
• Product: transcriptional regulator, IclR family
• Protein accession: YP_003261440
• Protein GI: 261823334

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATAT TCCAGCAACT CGAACACAGT AAAGCGCCTG CAGCGGTCCG TTTAGTGATG 
ATTATTGACT ACATTGCCAA ACGCGACGAA GCCAGTTTCA CTGAGATATG TACTGACTTG 
TCTATTCCAA AAAGCAGCGT ACATCATCTA TTGGAAGTGC TGGTGATCAC ACAGCTATTA 
CGCCAGCGCG CTGACGGGCG TTATGTTTTG GGGTTGAGAC TGTTTGAACT GGGTGGTCTG 
GTAATAAAGA ATATTGATCT GCGTAAAGAT ACGATTAACT TTATGCATGA GCTGGTCAAA 
GAAACGGAGT TGACCTGCCA TCTTGGTATT CTGGACGGCG ATAATGGTTT CTTCCTGAGT 
AAAGTAGAAT CTCCCAAGGC CATTGTAAAA ACATCCTGGG AAGGTAAGAA AATCATTTTT 
AACCGTATGT CTCTGGGAAA AGTGCTCATA GCCTGGCTTC CACAGGAAAG AATTGAATCG 
CTGATTGCCA ATTGCACCTT TGAGTATTTA ACGCCCCGGA CAATTACCAA TAAAGGCGAT 
TTCTTACAAC ACCTGAAAAC CGTTAAGGAA CAAGGCTGGG CAATAGATGA CGGTGAAGAT 
ATAGAAGAAA TCTGCTGCAT GGCGGCTCCA ATCTTTAACC AGGATGGTGA CGTCATCGCC 
GCTATCGGCG TTAACGGTAT GCAATCGCAA TATGCTAATG GAAAAAAAGA GAAGCATCTG 
GCGAGCCTGA TTAAAACCAG CAAGGCTATC ACCGCCCATA TTAATAGCCG GAGCACTGAT 
AGTAGATAA 

 

Protein sequence

MNIFQQLEHS KAPAAVRLVM IIDYIAKRDE ASFTEICTDL SIPKSSVHHL LEVLVITQLL 
RQRADGRYVL GLRLFELGGL VIKNIDLRKD TINFMHELVK ETELTCHLGI LDGDNGFFLS 
KVESPKAIVK TSWEGKKIIF NRMSLGKVLI AWLPQERIES LIANCTFEYL TPRTITNKGD 
FLQHLKTVKE QGWAIDDGED IEEICCMAAP IFNQDGDVIA AIGVNGMQSQ YANGKKEKHL 
ASLIKTSKAI TAHINSRSTD SR