Gene Pecwa_4096 details

Gene Information

• Locus tag: Pecwa_4096
• ID: 8532529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4510748
• End bp: 4511533
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 49%
• Product: microcompartments protein
• Protein accession: YP_003261431
• Protein GI: 261823325

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGATA ATCTTGTTGA ACAGATTATA TCTGAAGTAA TGAATAAACA GGCTGATGTG 
AGCGAAAATA ACAAAACCGT AAACAGCGTT ATTGGTTGTG GTTTAACGGA ATTTGTTGGT 
ACAGCTCTGG GACATACTAT TGGGCTGGTT ATTGCCAATG TCGATCATCA GTTGCATGAA 
ATCATGAATA TCGACAAGAA ATATCGCTCA ATCGGTATTC TTGGCGCGCG TACCGGTGCC 
GGCCCACATA TTTTCGCGGC GGATGAAGCT ATTAAAGCCA CGAACAGCGA AATTCTTTCT 
ATTGAGCTGG CTCGTGATAC CGAAGGTGGT GGTGGACATG GGTGTTTAAT CATTTTTGGT 
GCATCCGATG TGTCAGATGT TCGCCGTGCG GTTGAAGTCG CTCTGGGTGA AATTGAGCGA 
ACGATGGGGG ATGTCTACGG TTCGCCGGCA GGTCATCTGG AATTCCAGTA CACCGCTCGC 
GCCAGCTATG CCCTCAATAA AGCGCTAGGC GCACCAGTGG GTAAATCCTT CGGAATGACT 
TGTGCTTCTC CTGCCGCGAT TGGTGTGGTT GTCGCCGATG CTGCTGCAAA AGCGGCTGTG 
ATCGAGCCAG TGGGCTATGC CAGTCCTGCA CACGGCACCA GTTTTAGTAA CGAAGTGATT 
TTCACTTTTT CTGGTGATTC TGGCGCCGTT CGTCAAGCGG TTATTTCGGC AAGAGAGGTC 
GGTAAGAAAC TGCTGGCTAC TCTGGATCCG GCACCAATCA AATCGACAAC GACACCGTAC 
ATTTGA 

 

Protein sequence

MRDNLVEQII SEVMNKQADV SENNKTVNSV IGCGLTEFVG TALGHTIGLV IANVDHQLHE 
IMNIDKKYRS IGILGARTGA GPHIFAADEA IKATNSEILS IELARDTEGG GGHGCLIIFG 
ASDVSDVRRA VEVALGEIER TMGDVYGSPA GHLEFQYTAR ASYALNKALG APVGKSFGMT 
CASPAAIGVV VADAAAKAAV IEPVGYASPA HGTSFSNEVI FTFSGDSGAV RQAVISAREV 
GKKLLATLDP APIKSTTTPY I