Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4093 |
Symbol | |
ID | 8532526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4508279 |
End bp | 4508854 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | intracellular protease, PfpI family |
Protein accession | YP_003261428 |
Protein GI | 261823322 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGAA TTCTGATGCT TGCAGGCGAT TTCTCTGAAG ACTATGAAGT CATGGTGCCA TGGCAGGCAT TAAGCATGTT AGGTTTCAGA GTTGATGTAG TTTGCCCGGG AAAACGTACT GGGGAATATA TTAAGACCGC GATTCATGAT TTTGAAGGCG ACCAAACTTA TACCGAGAAA CCCGGTCATT TATTTCGATT AACCGCATCT TTTGATGAAG TCAGGATGCA AGAGTACGGT GGTGTATATA TTGCTGGTGG TCGAGCACCA GAATATTTAC GCCTGAATAA ATCAGTACTG AACATTATTC ACTATGCGAA TAATTTTACA TTACCTATTG CGGCAATTTG TCATGGCCCT CAGATTTTGG TCGCGGCAGG CATATTAAAA GGAAAGAAAC TGACGGGATA TTTCACTTTA AAACCTGAGA TTGAAATGGC AGGAGGAAAG TGGATTACCG CCGCCGATGA CGAGGCCATA CAAGATGGCA ATCTGGTCAC CGCCGCAACC TGGATGGGAC ATCCGGCAAT ATTACGTCAA TTTATTAGTT TAATAGGCAC CAGCATTATT CACTAG
|
Protein sequence | MKRILMLAGD FSEDYEVMVP WQALSMLGFR VDVVCPGKRT GEYIKTAIHD FEGDQTYTEK PGHLFRLTAS FDEVRMQEYG GVYIAGGRAP EYLRLNKSVL NIIHYANNFT LPIAAICHGP QILVAAGILK GKKLTGYFTL KPEIEMAGGK WITAADDEAI QDGNLVTAAT WMGHPAILRQ FISLIGTSII H
|
| |