Gene Pecwa_4090 details

Gene Information

• Locus tag: Pecwa_4090
• ID: 8532523
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4503724
• End bp: 4504521
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 52%
• Product: MIP family channel protein
• Protein accession: YP_003261425
• Protein GI: 261823319

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAAT CATTAAAAGG GCCATGTATT GCAGAGTTTC TTGGTACCGG ATTGTTTATG 
TTCTTCGGCA CTAGCGTAAT CTGCGCGGCA AAACTCGCTG GTGCCAGCTT TGGCCTTTGG 
GAAATATGTA TAGTATGGGG TTTAGGTATC GCTCTCGCGG TCTATCTGAC GGCTGGCATA 
TCCGGCGCGC ACCTTAACCC TGCCGTGACG ATCTCTCTGT GGATATTTGC CCACTTTGAT 
GCCAAAAAAG TCGTGCCTTA TATTCTGGCG CAGCTAGCGG GTGCATTTTG CGGTGCCGCA 
CTCACCTATT TGCTTTACCA CAATATGTTT GCTGAGTATG AACAAGCTCA CCAGATGGTA 
CGCGGTAGTC AGGATAGCCT GTTTCTGGCC AGCATCTTTT CTACTTATCC GGCATCGAGT 
ATTAGCGTTT GGCTGGCCGC ACTTGTGGAA ATTGTCATCA CCTCGATGCT CGTTGGGCTC 
ATTATGGCCT TGACCGATGA CGGTAACGGC GTTCCCAGAG GGCCGCTTGC CCCATTGCTG 
ATTGGTCTGC TTATTGCAGT AATCGGTGCT GCGACTGCGC CGTTGACGGG GTTTGCCATG 
AATCCCGCCC GCGACTTCGG CCCGAAACTT TTCACCTGGC TAAACGGCTG GGGATCGGTG 
GCAATGACCG GCGGCAGAGA CATTCCCTAC TTTCTTGTCC CTCTGATTGC ACCAGTGATC 
GGTGGGCTCC TTGGTGCGGC CATTTATCGC TATGGTATCG GGCGTTATCT GCCTTATGCA 
CAAGCAAGCG GTAAATAA 

 

Protein sequence

MNESLKGPCI AEFLGTGLFM FFGTSVICAA KLAGASFGLW EICIVWGLGI ALAVYLTAGI 
SGAHLNPAVT ISLWIFAHFD AKKVVPYILA QLAGAFCGAA LTYLLYHNMF AEYEQAHQMV 
RGSQDSLFLA SIFSTYPASS ISVWLAALVE IVITSMLVGL IMALTDDGNG VPRGPLAPLL 
IGLLIAVIGA ATAPLTGFAM NPARDFGPKL FTWLNGWGSV AMTGGRDIPY FLVPLIAPVI 
GGLLGAAIYR YGIGRYLPYA QASGK