Gene Pecwa_4056 details

Gene Information

• Locus tag: Pecwa_4056
• ID: 8532489
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4465630
• End bp: 4466307
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 50%
• Product: ribulose-phosphate 3-epimerase
• Protein accession: YP_003261392
• Protein GI: 261823286

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00103124
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCGT TTTTAATCGC GCCGTCTATT TTGTCGGCTG ATTTTGCCCG TCTTGGTGAA 
GATACCGCTA ACGTATTAGC TGCCGGGGCT GATGTGGTGC ATTTTGATGT CATGGATAAC 
CACTACGTGC CAAATTTGAC GATTGGCCCG CTGGTACTGA AATCCCTGCG CGATTACGGC 
ATTACCGCGC CGATTGATGT TCACCTGATG GTGAAACCGG TTGATCGTAT CATCCCCGAT 
TTCGCCAACG CGGGAGCCAG TTTCATTACC TTTCATCCCG AAGCTACCGA TCATCTCGAT 
CGTTCACTCC AACTCATCAA AGATCACGGC TGCAAGGCCG GGCTGGTGTT TAACCCTGCG 
ACCCCGCTAA GTTACCTCGA TTACGTCATG GATAAGCTGG ATATCATTCT TCTGATGTCG 
GTTAACCCTG GATTTGGCGG TCAGTCCTTT ATTCCCAGCA CGTTGGATAA GCTTCGTCAG 
GTTCGTCGCT TGATCGACGA TAGCGGTTAC GACATTCGAC TGGAAGTCGA TGGCGGGGTA 
AAAGTGGATA ATATCGGCGC GATTGCGGAA GCTGGCGCGG ATATGTTTGT GGCGGGATCG 
GCTATTTTTG GTCATCCAGA TTACCGTACC GTTATCGATC AAATGCGTAA TGAAATTTCA 
AGGACGAAAC ATGACTGA 

 

Protein sequence

MKPFLIAPSI LSADFARLGE DTANVLAAGA DVVHFDVMDN HYVPNLTIGP LVLKSLRDYG 
ITAPIDVHLM VKPVDRIIPD FANAGASFIT FHPEATDHLD RSLQLIKDHG CKAGLVFNPA 
TPLSYLDYVM DKLDIILLMS VNPGFGGQSF IPSTLDKLRQ VRRLIDDSGY DIRLEVDGGV 
KVDNIGAIAE AGADMFVAGS AIFGHPDYRT VIDQMRNEIS RTKHD