| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4053 |
|---|
| Symbol | |
|---|
| ID | 8532486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4462400 |
|---|
| End bp | 4463857 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003261389 |
|---|
| Protein GI | 261823283 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.809989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAA CACACAATGA AGGAACGCTG CCTGCCGTCA ATCACCAGAC CGTGGAAGAG
ATCTGCGACC TGATTGCGGC CAAGCGGCAG CAATTCTGTA CGCTGAGCGA CGGTATCTGG
GATACGCCAG AACTGAACTA CGAAGAACAC CGTTCAGCCG CACAGCACGA AGCCGTACTG
AAGGCAGAAG GTTTTCGCCT GACGAAAGGC ATTGCCAACA TGCCGACTGC GCTACTGGGG
GAATTCGGTG AAGGTCTGCC GATTATCGCC ATTCTGGGTG AATATGATGC GCTGCCGGGC
CTGAGCCAGC AGGCAAATGT CGCAGAGCCG AAGCCGCTGG AAAATGGTGG CAACGGCCAC
GGCTGCGGGC ATAATCTGCT CGGTACCGCA GCGCTACAGG CCGCAACGGC AGTGAAAGAT
TATCTGCAAA AGCACGCGCT GGCCGGAACC GTGCGCTTTT ACGGCTGCCC TGCGGAAGAA
GGCGGATCGT CCAAAGGTTT TATGGTCAAG GAAGGCGTGT TTGATGACGT CGATATCGCC
CTCTGCTGGC ATCCGGCGAC CTTCACTGGC GTCAACAGCC CGGTATCACT GGCCTGCAAC
GAACTGAATT TTTACTTCAA AGGCCGTGCC GCCCATGCTG CCAGCAGCCC ACACTTAGGG
CGCAGCGCGT TGGACGCCGT TGAATTAATG AATGTTGGCG TGAACTACAT GCGCGAACAT
ATGCCGTCCT CCGCGCGCGT TCACTACGCA ATTACCGACA GCGGCGGTCA GGCACCAAAC
GTCGTGCAGG CTAACGCGAC CGTGCGTTAC CTTGTACGAG CACGCCAGTT GCCGGAACTG
CATCAGTTGG TCAAACGCGT GAAAAAAATT GCCGAAGGCG CGGCGCTAAT GACAGAAACC
GAAGTCAGCA GCGAGGTGAT TAGCGGTGAT GCCAACCTGC TGGCAAATCC GCCGCTGGAA
GCGCGTATGC ATGAACACCT GCTGGCACTC GGCCCGATAC CGTTCGATGA CGAAGATCGT
AAGGTCGCGG CAATGTTCCA GACGGCGCTG AGCGCCGAAG ACATCGCCGA ATCCTACGCA
CGTTTTGGCG TCAAACCTCA ACCGGGTTTA ACGCTGCACG ATGGAATTTA TCCGCTGTAT
AGCCCGAATG AAGCCTTCAT CGGCTCCACC GATGTGGGAA CGGTCAGTTG GGTGGTGCCG
ACCGTGCAGA TTCGCAGCGC CACTTACGCC ATCGGTACAC CGGCGCATTC GTGGCAGTTG
GTTGCACAGG GGAAAACCGG TGCAGCGCAC AAAGGCATGG AATATGCGGC AAAAGCGATG
GCGTCACTGG CTATCGATCT GCTGGCCACA CCGGAACTGA TTACTCAGGC AAAAGCCGAC
CATCAGGAAA GATTGCGACA CACACCGTTT GAGAACCCGA TTCCAGATGA CGTGTTCGCG
CCTATCCCGC AGGGATAA
|
|---|
| Protein sequence | MNATHNEGTL PAVNHQTVEE ICDLIAAKRQ QFCTLSDGIW DTPELNYEEH RSAAQHEAVL
KAEGFRLTKG IANMPTALLG EFGEGLPIIA ILGEYDALPG LSQQANVAEP KPLENGGNGH
GCGHNLLGTA ALQAATAVKD YLQKHALAGT VRFYGCPAEE GGSSKGFMVK EGVFDDVDIA
LCWHPATFTG VNSPVSLACN ELNFYFKGRA AHAASSPHLG RSALDAVELM NVGVNYMREH
MPSSARVHYA ITDSGGQAPN VVQANATVRY LVRARQLPEL HQLVKRVKKI AEGAALMTET
EVSSEVISGD ANLLANPPLE ARMHEHLLAL GPIPFDDEDR KVAAMFQTAL SAEDIAESYA
RFGVKPQPGL TLHDGIYPLY SPNEAFIGST DVGTVSWVVP TVQIRSATYA IGTPAHSWQL
VAQGKTGAAH KGMEYAAKAM ASLAIDLLAT PELITQAKAD HQERLRHTPF ENPIPDDVFA
PIPQG
|
|---|
| |