Gene Pecwa_4049 details

Gene Information

• Locus tag: Pecwa_4049
• ID: 8532482
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4459149
• End bp: 4459865
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 57%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003261385
• Protein GI: 261823279

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAGACA TTAGTTTCTG GCAGCTCATC AGTTTTGGTG AACACGGCTG GGGAAAATTA 
TTACTGATTG GGGCAGGAAT GACGATCGCA CTGGCGATCG GTGGCTTCCT GCTGGGGGCC 
GTGATCGGCA CGATCGGAGC CTGGTCCAAA ATTTGCGGCA ATCGCCCCGT GCGCTATCTG 
GCCGATGGCT ACACCACACT CATCCGTGGC GTCCCCGATC TACTCATCAT CTACCTACTT 
TATTTCGGCG GCAGCTCGGC GTTAACCCTG CTCGCCAAAC TGTTTGGCAG CAATGAGTTC 
TTTGGCTTTC CGGGTTTCCT CGCCGGGGTA CTCGCCGTCG GCATTTCCTC CGGTGCGCAG 
CAGACGGAAG TCTACCGCGG TGCCTTCTAC GCCGTTTCCA AAGGGGAAAT TGAGGCCGCC 
AAAGCTTGTG GTATGCCAAC GCTATTGCGT CTGCGCCGCA TCATCATACC GCTCCTGTTG 
CGCCACGCGA TCCCCCCACT CGGCAACGTG TGGCAACTGG TGCTGAAAAC CTCTGCGCTG 
GTTTCCGTTA CTGGTGTCGC AGAGCTGATG ACGCAATCGC AAACCGGTGC CGGTTCTACC 
GGTAAACCGT TTGATTTCTT CATGGCGGCC GCGCTGCTGT ATCTGCTTAT CTCAATCTGT 
TCCGGCTGGA TTATGCGCCG TGCTGAGTCT CATTATTCCC GGGGTGTGAA ACGCTGA 

 

Protein sequence

MEDISFWQLI SFGEHGWGKL LLIGAGMTIA LAIGGFLLGA VIGTIGAWSK ICGNRPVRYL 
ADGYTTLIRG VPDLLIIYLL YFGGSSALTL LAKLFGSNEF FGFPGFLAGV LAVGISSGAQ 
QTEVYRGAFY AVSKGEIEAA KACGMPTLLR LRRIIIPLLL RHAIPPLGNV WQLVLKTSAL 
VSVTGVAELM TQSQTGAGST GKPFDFFMAA ALLYLLISIC SGWIMRRAES HYSRGVKR