| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4047 |
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| Symbol | nirD |
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| ID | 8532480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 4456800 |
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| End bp | 4457168 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | nitrite reductase small subunit |
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| Protein accession | YP_003261383 |
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| Protein GI | 261823277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAGT GGACTACCGT ATGTAAGTTA GACGACATCC TACCCGGCAC CGGTGTTTGT
GCGCTGGTTG AACAGCAGCA GATCGCCGTG TTCCGGCCAC GTAACGATGA GCAGATTTAC
GCCATCAGCA ATATCGATCC GTTCGCCCAA GCGAGTGTGT TAAGCCGTGG GATAGTGGCT
GAACATCAGG ACGAGCTTTG GGTCGCAAGC CCATTGAAAA AACAGCATTT CCGCCTTTAT
GACGGCTTCT GCCTGGAAGA TGGTGCCTAT TCTGTTGCAG CTTATGATAC TCAGGTAACA
AACGGTAATG TGCAAATATC CATCGCAAAC AGTAACGTAG CGGTTGATAA TAGCCGACCA
TTACCGTAA
|
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| Protein sequence | MSQWTTVCKL DDILPGTGVC ALVEQQQIAV FRPRNDEQIY AISNIDPFAQ ASVLSRGIVA
EHQDELWVAS PLKKQHFRLY DGFCLEDGAY SVAAYDTQVT NGNVQISIAN SNVAVDNSRP
LP
|
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