| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4023 |
|---|
| Symbol | |
|---|
| ID | 8532456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4427127 |
|---|
| End bp | 4427711 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | FKBP-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_003261359 |
|---|
| Protein GI | 261823253 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAG CAAAAGATCT GGTGGTCAGC CTGGCCTATC AGGTACGTAC AGAAGACGGT
GTTTTGGTTG ATGAGTCTCC GGTGAGCGCG CCGTTGGACT ATCTGCATGG TCACGGTTCC
CTGATTTCAG GTCTGGAAAC TGCGTTGGAA GGCCGTGAAG CTGGCGAAAC GTTTGATGTG
AACATTGGTT CCAGCGACGC TTACGGCAAC TATGACGAGA ATCTGGTTCA ACGCGTACCG
AAAGATGTCT TTATGGGCGT TGACGAATTG CAAGTTGGCA TGCGTTTTCT GGCTGAAACC
GATCAGGGTC CTGTTCCGGT TGAAATCACT GAAGTTGAAG ACGACCACGT TGTTGTCGAC
GGCAACCACA TGCTGGCAGG TCAAAACCTG AGCTTCCATG TTGAAGTGAT TGCTATTCGC
GAAGCGACGG AAGAAGAATT GGCGCACGGT CACGTTCATG GCGAACACGA TCACGAACAC
GGTGACGGCT GCTGTGGCGG TCATGGCCAT GACCACGATC ATGACCATGA TCACCAACAC
GGTAAAGGCG GCTGCGGCGG CCACGGTGGA TGCGGTTGCC ACTAA
|
|---|
| Protein sequence | MKVAKDLVVS LAYQVRTEDG VLVDESPVSA PLDYLHGHGS LISGLETALE GREAGETFDV
NIGSSDAYGN YDENLVQRVP KDVFMGVDEL QVGMRFLAET DQGPVPVEIT EVEDDHVVVD
GNHMLAGQNL SFHVEVIAIR EATEEELAHG HVHGEHDHEH GDGCCGGHGH DHDHDHDHQH
GKGGCGGHGG CGCH
|
|---|
| |