| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3994 |
|---|
| Symbol | rplP |
|---|
| ID | 8532427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4405988 |
|---|
| End bp | 4406398 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_003261331 |
|---|
| Protein GI | 261823225 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000110255 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACAAC CAAAGCGTAC AAAATTCCGT AAGGTGCACA AGGGCCGCAA CCGTGGTCTG
GCGCAGGGTA CGGATGTTAG CTTCGGCACT TTCGGTCTGA AAGCTGTTGG CCGCGGTCGC
CTGACTGCTC GTCAAATCGA AGCTGCACGT CGTGCCATGA CTCGTGCTGT TAAGCGTCAA
GGTAAGATCT GGATCCGTGT ATTCCCGGAC AAACCGATCA CCGAGAAACC GCTTGAAGTT
CGTATGGGTA AAGGTAAAGG TAACGTGGAA TATTGGGTTG CCTTGATTCA GCCAGGTAAA
GTCCTGTACG AAATGGACGG TGTGCCGGAA GAGTTAGCCC GTGAGGCATT CCAACTGGCA
GCAGCGAAAC TGCCTATCAA AACCACCTTT GTAACTAAGA CGGTGATGTA A
|
|---|
| Protein sequence | MLQPKRTKFR KVHKGRNRGL AQGTDVSFGT FGLKAVGRGR LTARQIEAAR RAMTRAVKRQ
GKIWIRVFPD KPITEKPLEV RMGKGKGNVE YWVALIQPGK VLYEMDGVPE ELAREAFQLA
AAKLPIKTTF VTKTVM
|
|---|
| |