| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3982 |
|---|
| Symbol | rplO |
|---|
| ID | 8532415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4401336 |
|---|
| End bp | 4401770 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | 50S ribosomal protein L15 |
|---|
| Protein accession | YP_003261319 |
|---|
| Protein GI | 261823213 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.442954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAA ATACTCTGTC TCCGGCCGAA GGTGCTAAAC ATGCACCGAA GCGTTTAGGT
CGTGGTATCG GTTCTGGCCT GGGCAAAACT AGCGGTCGTG GTCACAAAGG TCAGAACTCT
CGTTCTGGTG GTGGCGTGCG CCGTGGTTTT GAAGGTGGTC AGATGCCTTT ATACCGTCGT
CTGCCGAAAT TCGGTTTTAC TTCTCGTAAA GCAATGATCA CGTCAGAAGT TCGTTTGTCT
GATCTTGCTA AAGTAGAAGG CGACGTAGTT GACCTGAATA CGCTGAAAGC CGCTAATGTT
ATTGGCATTC AGATTGAATT CGCGAAAGTG ATTCTGTCTG GTGAAGTTGC TCGTCCGGTA
ACGATTCGTG GTCTGCGTGT CACTAAAGGT GCTCGTGCTG CTATCGAAGC TGCTGGCGGT
AAAATTGAGG AATAA
|
|---|
| Protein sequence | MRLNTLSPAE GAKHAPKRLG RGIGSGLGKT SGRGHKGQNS RSGGGVRRGF EGGQMPLYRR
LPKFGFTSRK AMITSEVRLS DLAKVEGDVV DLNTLKAANV IGIQIEFAKV ILSGEVARPV
TIRGLRVTKG ARAAIEAAGG KIEE
|
|---|
| |