| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3975 |
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| Symbol | |
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| ID | 8532408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 4397272 |
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| End bp | 4398261 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_003261313 |
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| Protein GI | 261823207 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.109513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGGTT CTGTGACAGA GTTTCTAAAA CCGCGCCTGG TTGATATCGA GCAAGTGAGT
TCGACGCACG CCAAGGTGAC CCTTGAGCCA TTAGAGCGAG GCTTCGGCCA TACTCTTGGC
AACGCACTGC GCCGTATTCT GCTTTCATCC ATGCCAGGTT GCGCGGTGAC CGAGGTTGAG
ATTGATGGTG TACTGCATGA GTACAGCACC AAAGAAGGCG TACAGGAAGA TATCCTGGAA
ATCCTGCTCA ACCTGAAAGG GCTGGCGGTG AGAGTTCAAG GCAAAGATGA AGTTATTCTT
ACCCTGAATA AATCTGGCAT TGGCCCTGTG ACTGCAGCCG ACATCATCCA TGATGGTGAT
GTCGAAATCG TCAAGCCGCA GCACTTAATT TGCCACCTGA CCGATGAAAA CGCATCTATT
AGTATGCGTA TCAAAGTTCA ACGTGGTCGT GGTTATGTGC CGGCATCTGC CCGTATTCAT
ACGGAAGAAG ATGAGCGCCC GATTGGTCGT CTGTTAGTTG ATGCTTGCTA CAGCCCTGTA
GAGCGTATTG CCTACAATGT TGAAGCAGCT CGCGTAGAAC AGCGTACTGA CTTGGACAAG
CTAGTCATCG AGATGGAAAC CAATGGTACG ATCGATCCTG AAGAGGCGAT CCGCCGTGCG
GCCACCATTC TGGCTGAACA ACTTGAAGCT TTTGTTGACT TACGTGATGT TCGTCAGCCA
GAAGTTAAAG AAGAGAAACC AGAGTTCGAT CCGATCCTGC TGCGCCCTGT TGACGATCTG
GAATTGACTG TCCGCTCTGC TAACTGCCTT AAGGCAGAAG CTATCCACTA CATCGGTGAT
CTGGTACAGC GTACCGAGGT TGAGCTGCTC AAAACGCCTA ACCTGGGTAA AAAATCTCTT
ACTGAGATTA AAGACGTACT GGCTTCCCGT GGTTTGTCTC TGGGCATGCG CCTAGAAAAC
TGGCCACCTG CAAGCATTGC TGATGAGTAA
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| Protein sequence | MQGSVTEFLK PRLVDIEQVS STHAKVTLEP LERGFGHTLG NALRRILLSS MPGCAVTEVE
IDGVLHEYST KEGVQEDILE ILLNLKGLAV RVQGKDEVIL TLNKSGIGPV TAADIIHDGD
VEIVKPQHLI CHLTDENASI SMRIKVQRGR GYVPASARIH TEEDERPIGR LLVDACYSPV
ERIAYNVEAA RVEQRTDLDK LVIEMETNGT IDPEEAIRRA ATILAEQLEA FVDLRDVRQP
EVKEEKPEFD PILLRPVDDL ELTVRSANCL KAEAIHYIGD LVQRTEVELL KTPNLGKKSL
TEIKDVLASR GLSLGMRLEN WPPASIADE
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