Gene Pecwa_3940 details

Gene Information

• Locus tag: Pecwa_3940
• ID: 8532368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4355580
• End bp: 4356164
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 51%
• Product: outer membrane lipoprotein Blc
• Protein accession: YP_003261278
• Protein GI: 261823172

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCCCT TTAACGCCAT TCGCTTTAAT ACAACGTTCT TCAAATCTCT TATCTTCAAA 
ATCAGACGAT ATGGGAAAAC ATGTGTTGCT GTTCTGGTAG CACTCTTCTC TGTCGCCTGT 
AGCGTAACAC CACCTGATAA CGTCAGCGTT GTGGAAAACG TTGACGTCAA TCGTTACCTC 
GGCACATGGT ATGAAATCGC CCGTCTCGAC CACCGCTTTG AACGCAATCT GGAACGCGTG 
ACGGCAACCT ACAGCCTACG GGATGACGGC GGAGTCAAAG TCATCAATCG CGGCTTTAAC 
GTCAAAAAGC AGGAATGGAA AGAAAGCATC GGAAAAGCGT ATTTCACGGG ATCGCCCCAG 
CGTGGGGCGC TAAAAGTGTC ATTCTTCGGG CCGTTCTATG GCGGTTACAA CATCATTGAA 
CTGGATGACG ACTACCGCTA CGCCCTGATT TGCGGGCCGA ACCGTGACTA CCTATGGATC 
CTCTCACGCA CGCCAACGTT GGATACTGCG ACACGCGATA AATTGGTCGC CACGGCCAAA 
CGCTACGGCT TCCCAACAGA GGCGCTGATC TGGGTCAACC AGTAA 

 

Protein sequence

MMPFNAIRFN TTFFKSLIFK IRRYGKTCVA VLVALFSVAC SVTPPDNVSV VENVDVNRYL 
GTWYEIARLD HRFERNLERV TATYSLRDDG GVKVINRGFN VKKQEWKESI GKAYFTGSPQ 
RGALKVSFFG PFYGGYNIIE LDDDYRYALI CGPNRDYLWI LSRTPTLDTA TRDKLVATAK 
RYGFPTEALI WVNQ