Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3924 |
Symbol | |
ID | 8532350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4332048 |
End bp | 4333580 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003261262 |
Protein GI | 261823156 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00146397 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGGTC ACGATCGGAA GCGAGAGGAT GATTTGCCCG ATTCGGTGTT CTACGCTGAG TGGGTGCGCC GTGAAGAGGC CGGTGCAGCT CGTGAATCAG GGCTTTCATT GTGGGATCTG ATGCAGCGTG CGGGAGACGC CGCATTTCAA GTGGCTTGCC AATCTTATCC TTCAGCCCGA CGCTGGCGAG TGCTGGCTGG ACACGGCAAT AACGGTGGAG ATGGATATGT GGTCGCCAGT TTGGCGCTGG CGGCGGGTAT TGCGGTGGAT GTTGTTGCCT GCGCCAGCGA TAAACCGCTG CCCGATGATG CCCGTTTTGC TCGGCAGCGC TGGCTGGCGC AGGGCGGGCG TATTGAAGAC GTTAGGGCGC AGGATGATGC TAATACGCCG TGGCCGGATG GGATCGATCT CATTGTGGAT GCTCTACTGG GGACCGGACT TTCCGCCGCA CCGCGTGCAC CCTATGCCGC GTTAATTACG CAGGCGAATG CCTATCCCGC TCCCATTGTT TCATTGGATA TTCCCTCTGG CTTACATGCC GAAACCGGTG CCTGTGCGGG CGTTGCGATC TGTGCGGCAC AGACAGTGAC GTTTATCGCG CTGAAGCCGG GGCTACTGAC TGGCCGCGCG CGTGAGCAGG TCGGGGCATT GCATTATCAC TCGCTAGGGT TGCAGACGTG GCTGGGTGAC CAAACCGCGC CGATCCGGCG ACTGACTGCG GCACAGCTTC CCGAATGGTT GATGCCTCGT CCTGCCGGAC AACATAAAGG GGATAACGGC AGGCTGTTGG TGGTCGGCGG CAACGCAGGC TTAGGTGGTG CGGTACTGAT GGCTGCCGAT GCGGCGCTGC ACAGCGGTGC AGGCTTAGTG CGAGTACTTA CTCACAAACA GTATCAATCG GCGTTTCTGG CGACCCGACC TGAGTTGATG GTGCAAGAAT TGACGGCGGA TACGCTGCGA CAGGGGTTGG AGTGGGCTGA TGTCGTGGTG ATTGGACCCG GTTTAGGGCA GGATGAATGG GGTAAAAACG CCCTGCGTCT GACAGAAAAT TGTAACAAAC CCATGTTATG GGACGCGGAT GCGCTTAACC TGCTGGCAAT CAACCCGCAT AAACGGCAGA ATCGCGTGCT GACACCTCAT CCCGGTGAAG CGGCACGTTT ACTGAATTGC CGCGTATCTG ATATTGAAAG TGATCGCTTA CTTGCGGCCA CAAAGCTGGT AAAGCGCTAT GGCGGCGTTG TCGTATTAAA AGGTGCGGGA ACGGTGATTG CCAGTCAGCA AGAAGAGATT GCTATTGCTG ATGTGGGAAA CCCCGGTATG GCGACGGGTG GCATGGGTGA TGTGCTGTCG GGTATTGTCG GCGGTTTGCT GGCGCAAAAG CTCTCGCTGT ATGATGCTGC TTGTGCTGGG TGTGTCGTAC ACGGTGCGGC GGCCGACTGG CTGGCGACTC GACGCGGTAC TCGAGGTATG TTGGCAACCG ATTTACTGCC CGTGTTGTTC CGATATGTGA ATCCTGATCG GGTGCTTTTT TAG
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Protein sequence | MTGHDRKRED DLPDSVFYAE WVRREEAGAA RESGLSLWDL MQRAGDAAFQ VACQSYPSAR RWRVLAGHGN NGGDGYVVAS LALAAGIAVD VVACASDKPL PDDARFARQR WLAQGGRIED VRAQDDANTP WPDGIDLIVD ALLGTGLSAA PRAPYAALIT QANAYPAPIV SLDIPSGLHA ETGACAGVAI CAAQTVTFIA LKPGLLTGRA REQVGALHYH SLGLQTWLGD QTAPIRRLTA AQLPEWLMPR PAGQHKGDNG RLLVVGGNAG LGGAVLMAAD AALHSGAGLV RVLTHKQYQS AFLATRPELM VQELTADTLR QGLEWADVVV IGPGLGQDEW GKNALRLTEN CNKPMLWDAD ALNLLAINPH KRQNRVLTPH PGEAARLLNC RVSDIESDRL LAATKLVKRY GGVVVLKGAG TVIASQQEEI AIADVGNPGM ATGGMGDVLS GIVGGLLAQK LSLYDAACAG CVVHGAAADW LATRRGTRGM LATDLLPVLF RYVNPDRVLF
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