Gene Pecwa_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3924 
Symbol 
ID8532350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp4332048 
End bp4333580 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003261262 
Protein GI261823156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00146397 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGTC ACGATCGGAA GCGAGAGGAT GATTTGCCCG ATTCGGTGTT CTACGCTGAG 
TGGGTGCGCC GTGAAGAGGC CGGTGCAGCT CGTGAATCAG GGCTTTCATT GTGGGATCTG
ATGCAGCGTG CGGGAGACGC CGCATTTCAA GTGGCTTGCC AATCTTATCC TTCAGCCCGA
CGCTGGCGAG TGCTGGCTGG ACACGGCAAT AACGGTGGAG ATGGATATGT GGTCGCCAGT
TTGGCGCTGG CGGCGGGTAT TGCGGTGGAT GTTGTTGCCT GCGCCAGCGA TAAACCGCTG
CCCGATGATG CCCGTTTTGC TCGGCAGCGC TGGCTGGCGC AGGGCGGGCG TATTGAAGAC
GTTAGGGCGC AGGATGATGC TAATACGCCG TGGCCGGATG GGATCGATCT CATTGTGGAT
GCTCTACTGG GGACCGGACT TTCCGCCGCA CCGCGTGCAC CCTATGCCGC GTTAATTACG
CAGGCGAATG CCTATCCCGC TCCCATTGTT TCATTGGATA TTCCCTCTGG CTTACATGCC
GAAACCGGTG CCTGTGCGGG CGTTGCGATC TGTGCGGCAC AGACAGTGAC GTTTATCGCG
CTGAAGCCGG GGCTACTGAC TGGCCGCGCG CGTGAGCAGG TCGGGGCATT GCATTATCAC
TCGCTAGGGT TGCAGACGTG GCTGGGTGAC CAAACCGCGC CGATCCGGCG ACTGACTGCG
GCACAGCTTC CCGAATGGTT GATGCCTCGT CCTGCCGGAC AACATAAAGG GGATAACGGC
AGGCTGTTGG TGGTCGGCGG CAACGCAGGC TTAGGTGGTG CGGTACTGAT GGCTGCCGAT
GCGGCGCTGC ACAGCGGTGC AGGCTTAGTG CGAGTACTTA CTCACAAACA GTATCAATCG
GCGTTTCTGG CGACCCGACC TGAGTTGATG GTGCAAGAAT TGACGGCGGA TACGCTGCGA
CAGGGGTTGG AGTGGGCTGA TGTCGTGGTG ATTGGACCCG GTTTAGGGCA GGATGAATGG
GGTAAAAACG CCCTGCGTCT GACAGAAAAT TGTAACAAAC CCATGTTATG GGACGCGGAT
GCGCTTAACC TGCTGGCAAT CAACCCGCAT AAACGGCAGA ATCGCGTGCT GACACCTCAT
CCCGGTGAAG CGGCACGTTT ACTGAATTGC CGCGTATCTG ATATTGAAAG TGATCGCTTA
CTTGCGGCCA CAAAGCTGGT AAAGCGCTAT GGCGGCGTTG TCGTATTAAA AGGTGCGGGA
ACGGTGATTG CCAGTCAGCA AGAAGAGATT GCTATTGCTG ATGTGGGAAA CCCCGGTATG
GCGACGGGTG GCATGGGTGA TGTGCTGTCG GGTATTGTCG GCGGTTTGCT GGCGCAAAAG
CTCTCGCTGT ATGATGCTGC TTGTGCTGGG TGTGTCGTAC ACGGTGCGGC GGCCGACTGG
CTGGCGACTC GACGCGGTAC TCGAGGTATG TTGGCAACCG ATTTACTGCC CGTGTTGTTC
CGATATGTGA ATCCTGATCG GGTGCTTTTT TAG
 
Protein sequence
MTGHDRKRED DLPDSVFYAE WVRREEAGAA RESGLSLWDL MQRAGDAAFQ VACQSYPSAR 
RWRVLAGHGN NGGDGYVVAS LALAAGIAVD VVACASDKPL PDDARFARQR WLAQGGRIED
VRAQDDANTP WPDGIDLIVD ALLGTGLSAA PRAPYAALIT QANAYPAPIV SLDIPSGLHA
ETGACAGVAI CAAQTVTFIA LKPGLLTGRA REQVGALHYH SLGLQTWLGD QTAPIRRLTA
AQLPEWLMPR PAGQHKGDNG RLLVVGGNAG LGGAVLMAAD AALHSGAGLV RVLTHKQYQS
AFLATRPELM VQELTADTLR QGLEWADVVV IGPGLGQDEW GKNALRLTEN CNKPMLWDAD
ALNLLAINPH KRQNRVLTPH PGEAARLLNC RVSDIESDRL LAATKLVKRY GGVVVLKGAG
TVIASQQEEI AIADVGNPGM ATGGMGDVLS GIVGGLLAQK LSLYDAACAG CVVHGAAADW
LATRRGTRGM LATDLLPVLF RYVNPDRVLF