| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3922 |
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| Symbol | |
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| ID | 8532348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 4329901 |
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| End bp | 4331529 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_003261260 |
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| Protein GI | 261823154 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00766484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGTC GTATGGTTAA GCTGTTCATC GGCGTATGGC TATTGCTTGC GGGAGCAGCG
TGGGCCGCCA ATCTATCGGA TATCAAGGTG GATAATGCGT CAGGCCAAGC CACGGTGCGA
CTGAGCTTTA GCGGCCAGCC GATTTATGCC TTTTTCCCGC TTAGCAACCC TGCCAGAGTG
GTCATCGATA TTCGTCAGAG CGGTGTCATT CAGGGGCTGC CGTTGGATTT CAGCGGGCAA
AATCTGATTA AGCGCGTGCG AAGCAGCAAT GCGCAGGATG CACAAAGCCT GCGGTTGGTG
CTGGATTTAA CGCAGGCGGC CAAAACGCGA GCGGTTACGC AAAAAGAAGG TTCGGGTTAC
GTTGTCGTGT TCACCATCAC GGGTGATAAA GCGAAAACGG TGCAAGCCCC AACGCCCCCT
GTTTCACGGC AGCAAAATAG TGTGCCGGCA GAGCCAGCAA AGAATCCGTT TACTAACAAG
CCTACGGTCG TCGTGAGCGG TGGGGCGTCG TCGCCTGCCC GACAGGGTAA TGAGCGCGTT
GTTGTGGCGA TTGATGCCGG TCACGGCGGG CAAGATCCTG GTGCGATAGG CACGAACGGG
CTGCGAGAGA AAAATGTCAC CATCTCTATC GCCCGTAAGC TGCAAGTTTT GCTGAATAAC
GATCCCGCCT TTAAAGGCGT ATTAACGCGT GACGGCGACT ACTTTATCTC CGTCATGGGG
CGTTCGGACG TGGCGCGGAA GCAGGGCGCT AACCTGTTAG TGTCGATCCA CGCCGATGCT
GCGCCGAACC GCAATGCTAA AGGTGCCTCG GTCTGGGTGC TATCCAACCG CCGTGCGAAT
AGTGAAATGG CGAACTGGCT GGAACAGCAC GAGAAACAGT CTGAGTTATT GGGCGGTGCG
GGCGATTTGC TGGCGAACAG CGGCGCCGAT CCTTACCTCA GTCAGGCGGT GCTGGATCTG
CAATTTGGCC ACTCCCAGCG TGTTGGGTAT GACGTGGCGA CCAAGGTGCT GCGTGAGCTC
CAGCGTGTTG GAGGCTTGCA TAAACGGCGG CCGGAACATG CCAGCTTGGG AGTGTTGCGC
TCACCGGATA TTCCCTCTCT GCTGGTGGAA ACCGGGTTTA TCACGAATAT CTCGGAAGAG
CGGCTATTGG GGAGTAACGA CTACCAGGAA AAAATTGCCA ATGCGATTTA TCAGGGGCTG
AGAAGTTACT TCCAGACGCA CCCGATGCAA TCCCTCCCAA AGCAGGAAAG CCGCCCACGA
CAGTCGGCGG CAAGTGATAC TGCGACATCG GGCAGTACGC GTCATACCGT TGCGCGTGGC
GAAACACTTT CTTCGATTGC ACGGCGTTAT GGTGTCAGCC TCGCGGCGAT GCGTGACGTG
AATAAGCTGA ACAAGGATAT CGTCTGGGTT GGACAGCGCC TGAATGTTCC GGCTACCGGG
ACGAAACAGA CGGCGTCAAC GCCAGCGCCT AAAAAAACAG CGCCGGTGAA GCATAAGGTC
GTAAAGGGTG ATAGCCTGAG TGCGATCGCT GCCCGTTACG GTGTCAGCAT GAAAGAGATT
CAACAGGCAA ATAATCTGCG TTCCGGCTCG GTACAACTGG GGCAAACGCT GATTATACCG
TCTGCCTGA
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| Protein sequence | MMSRMVKLFI GVWLLLAGAA WAANLSDIKV DNASGQATVR LSFSGQPIYA FFPLSNPARV
VIDIRQSGVI QGLPLDFSGQ NLIKRVRSSN AQDAQSLRLV LDLTQAAKTR AVTQKEGSGY
VVVFTITGDK AKTVQAPTPP VSRQQNSVPA EPAKNPFTNK PTVVVSGGAS SPARQGNERV
VVAIDAGHGG QDPGAIGTNG LREKNVTISI ARKLQVLLNN DPAFKGVLTR DGDYFISVMG
RSDVARKQGA NLLVSIHADA APNRNAKGAS VWVLSNRRAN SEMANWLEQH EKQSELLGGA
GDLLANSGAD PYLSQAVLDL QFGHSQRVGY DVATKVLREL QRVGGLHKRR PEHASLGVLR
SPDIPSLLVE TGFITNISEE RLLGSNDYQE KIANAIYQGL RSYFQTHPMQ SLPKQESRPR
QSAASDTATS GSTRHTVARG ETLSSIARRY GVSLAAMRDV NKLNKDIVWV GQRLNVPATG
TKQTASTPAP KKTAPVKHKV VKGDSLSAIA ARYGVSMKEI QQANNLRSGS VQLGQTLIIP
SA
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