Gene Pecwa_3901 details

Gene Information

• Locus tag: Pecwa_3901
• ID: 8532327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4307920
• End bp: 4308672
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 50%
• Product: peptidase M48 Ste24p
• Protein accession: YP_003261239
• Protein GI: 261823133

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATTC GTTCTTCTGT GCTGGCTCTG TGTGTCGCAA CGTTGCTGAC CGGCTGCCAG 
AATTTAAACA CCAATACCTT AATGCAATCC GGCGCACAGG CTTTCCAGGC AGCGACACTC 
AGTGATGCTC AGGTTAAAAC ACTCAGCGAT CAGTCCTGTG TGCAAATGGA TAAAGAGGCA 
AAAATTGCCC CTGCCGACAG CAAATACACG CAGCGCCTGA ATAAAATTGC AGATGCGCTG 
GGGCACGATA TCAACGGTAC GCCAGCGAAT TATAAGGTGT ATTTGACAAA AGATGTTAAC 
GCCTGGGCAA TGGCTAACGG CTGTATTCGT GTATACAGCG GTTTGATGGA TATGATGAAT 
GATAATGAAG TAGAAGGTGT ACTCGGCCAC GAAATGGGCC ACGTTGCACT GGGGCACACC 
CGCAAAGCAA TGCAGGTTGC CTATGCTGCG ACTGCCGCAC GTACCGCCGT TGCTTCTGCT 
GGCGGCGTGG CAGCATCATT ATCGCAATCA CAGTTAGCCG ATCTGGGCGA AGAACTGGTT 
AATTCCCAAT TCTCTCAATC TCAGGAAAGT CAGGCTGATG ACTATTCCTT TGATCTGCTG 
AAGAAACGCG GCATCAAGCG AGAAGGACTG GCAACCAGCT TTGAGAAACT GGCTAAACTG 
GATGCCGGTC ATGAGAGCAG TATGTTTGAT TCTCATCCGT CATCTGAAGG GCGCGCCAAA 
CACATCCGTG AACGCATCGC TACTGAGAAG TAA 

 

Protein sequence

MAIRSSVLAL CVATLLTGCQ NLNTNTLMQS GAQAFQAATL SDAQVKTLSD QSCVQMDKEA 
KIAPADSKYT QRLNKIADAL GHDINGTPAN YKVYLTKDVN AWAMANGCIR VYSGLMDMMN 
DNEVEGVLGH EMGHVALGHT RKAMQVAYAA TAARTAVASA GGVAASLSQS QLADLGEELV 
NSQFSQSQES QADDYSFDLL KKRGIKREGL ATSFEKLAKL DAGHESSMFD SHPSSEGRAK 
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