Gene Pecwa_3900 details

Gene Information

• Locus tag: Pecwa_3900
• ID: 8532326
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4305516
• End bp: 4307510
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 59%
• Product: transketolase
• Protein accession: YP_003261238
• Protein GI: 261823132

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTCTC GTAAAGAACT TGCCAATGCT ATCCGTGCGC TGAGCATGGA TGGGGTGCAG 
AAAGCCAAAT CCGGTCACCC GGGCGCACCG ATGGGCATGG CCGATATCGC CGAAGTCCTG 
TGGCGTGACT ATCTTAACCA TAATCCGGCC AACCCTAACT GGGCCAACCG TGACCGCTTC 
GTGCTGTCTA ACGGCCACGC GTCCATGCTG ATTTACAGCC TGCTGCACCT CTCTGGCTAC 
GACCTGCCGA TTGAAGAACT GAAAAACTTC CGTCAACTGC ATTCTAAAAC GCCAGGCCAC 
CCTGAATACG GCTACACCGC TGGCGTTGAA ACCACTACCG GTCCGTTGGG ACAAGGCGTT 
GCCAACGCCG TCGGTATGGC GATTGCCGAA CGCACGTTGG CGGCGCAGTT CAACCGTCCG 
GGCCACGAGA TTGTTAACCA TCACACCTAC ACCTTCCTCG GTGACGGCTG CATGATGGAA 
GGGATTTCCC ACGAAGTCTG TTCGCTGGCG GGCACCATGA AGCTCGGCAA ACTGACCGCG 
TTTTATGATG ACAACGGCAT CTCCATCGAC GGCCACGTAG AAGGCTGGTT TACCGACGAT 
ACCGCTGCCC GCTTTGAAGC CTACGGCTGG CACGTGGTAC GTGGCGTCGA CGGTCACGAT 
GCGGACGCTA TCAAGCGTGC CATCGGCGAA GCCCAGCTTG TCACCGACAA GCCGTCGCTG 
CTGATGTGCA AAACCGTGAT TGGCTTCGGT TCACCGAACA AGGCCGGAAC GCACGACTCG 
CATGGCGCAC CGCTGGGTGA CGCAGAAGTT GCGGCTTCCC GCGAACAGTT GGGCTGGACG 
CACGCACCGT TCGATATCCC GGCAGACATT TATGCGGCCT GGGATGCCAA ACCGGCCGGT 
CAGCGTAAGG AAGCGGCCTG GGACGAGGCG TTTGCCGCCT ATTCCAGCGC GTATCCGGAA 
CTGGCTGCCG AGTTCAAACG CCGTACCGGC GGTGAGCTGC CAGCCAACTG GCAAACTGAT 
GCACAGAAAT TTATCGAAGA CTTGCAGGCC AATCCGGCGA AAATCGCCAG CCGCAAAGCG 
TCACAGAATG CGCTGGAAGC CTACGGCAAA CTGCTGCCGG AATTCCTGGG CGGCTCTGCC 
GACCTGGCAC CGAGCAACCT GACCATCTGG TCCGGCTCGG TCTCGCTGGA TAAAGACCAC 
GCGGGTAATT ATATCCACTA CGGCGTGCGT GAATTCGGCA TGACGGCGAT CGCCAACGGG 
ATTGCGCTGC ACGGCGGCTT TGTGCCGTAC ACCGCGACCT TCCTGATGTT TGTCGAATAC 
GCGCGTAATG CGGTGCGTAT GGCTGCGCTG ATGAAAATCC GCAGCATCTA CGTCTACACC 
CATGACTCTA TCGGTCTGGG TGAAGACGGC CCGACCCACC AGCCGGTTGA ACAACTGGCC 
AGCCTGCGCG TGACGCCAAA TATGAGCAAC TGGCGTCCGG CGGATCAGGT GGAAACGGCG 
GTGGCGTGGA AATACGCGAT CGAGCGTCAG GACGGCCCAA CGTCACTGAT CCTGTCGCGT 
CAGAATCTGG CACAGCAGAC GCGTACCGCT GAACAACTGG CGAACGTGGC AAAAGGCGGT 
TACGTGCTGA AAGACAGCGA CGGCCAGCCG GAGCTGATCC TGATTGCCAC CGGTTCTGAA 
GTGGAACTGG CTGTGGGTGC GTATGACAAA CTGACTGCCG CAGGCCGCAA GGTGCGCGTG 
GTATCAATGC CGTCAACGGA TGCGTTCGAC AAGCAGGACG CGGCCTACCG TGAAGCGGTG 
CTGCCGAAAG CAGTTTCGGC ACGTGTGGCG ATTGAAGCCG GTATTGCGGA CTACTGGTTC 
AAGTACGTCG GCCTGAACGG CGCGATTGTC GGCATGACGA GCTTCGGCGA ATCGGCTCCG 
GCTGAGTTGC TGTTCGAGGA ATTCGGTTTC ACCGTCGATA ACGTGGTCGA AAAAGCGCAG 
GCGCTGCTGA AGTAA 

 

Protein sequence

MSSRKELANA IRALSMDGVQ KAKSGHPGAP MGMADIAEVL WRDYLNHNPA NPNWANRDRF 
VLSNGHASML IYSLLHLSGY DLPIEELKNF RQLHSKTPGH PEYGYTAGVE TTTGPLGQGV 
ANAVGMAIAE RTLAAQFNRP GHEIVNHHTY TFLGDGCMME GISHEVCSLA GTMKLGKLTA 
FYDDNGISID GHVEGWFTDD TAARFEAYGW HVVRGVDGHD ADAIKRAIGE AQLVTDKPSL 
LMCKTVIGFG SPNKAGTHDS HGAPLGDAEV AASREQLGWT HAPFDIPADI YAAWDAKPAG 
QRKEAAWDEA FAAYSSAYPE LAAEFKRRTG GELPANWQTD AQKFIEDLQA NPAKIASRKA 
SQNALEAYGK LLPEFLGGSA DLAPSNLTIW SGSVSLDKDH AGNYIHYGVR EFGMTAIANG 
IALHGGFVPY TATFLMFVEY ARNAVRMAAL MKIRSIYVYT HDSIGLGEDG PTHQPVEQLA 
SLRVTPNMSN WRPADQVETA VAWKYAIERQ DGPTSLILSR QNLAQQTRTA EQLANVAKGG 
YVLKDSDGQP ELILIATGSE VELAVGAYDK LTAAGRKVRV VSMPSTDAFD KQDAAYREAV 
LPKAVSARVA IEAGIADYWF KYVGLNGAIV GMTSFGESAP AELLFEEFGF TVDNVVEKAQ 
ALLK