| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3876 |
|---|
| Symbol | |
|---|
| ID | 8532302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4281274 |
|---|
| End bp | 4282506 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_003261215 |
|---|
| Protein GI | 261823109 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG TATCACTGGA AAAAGACAAG ATTAAGTTTC TGTTAGTGGA AGGCGTGCAC
CAGAGCGCGC TGGATAACCT GCGTGCAGCC GGTTACACCA ACATCGAGTT CCACAAAGGC
GCGCTGGATC CTGAGGCGCT GAAAGCCTCC ATTCGCGATG CGCATTTTGT TGGTATCCGC
TCGCGTACCC ATCTGACAGA AGAAATTTTT GCTGCGGCGG AAAAACTGAT CGCGGTAGGG
TGTTTCTGTA TTGGGACTAA CCAGGTTGAG CTGTCGGCCG CGACCAAGCG CGGTATTCCG
GTATTTAATG CACCTTTTTC CAATACCCGC TCTGTGGCAG AAATGGTGAT CGGCGAAATG
CTGCTGATGT TGCGCGGTAT TCCATCAGCG AACGCGAAAG CGCACCGTGG TATTTGGCAC
AAACTGGCGG TGGGATCGTT TGAAGCTCGC GGCAAAAAGC TTGGGATTAT CGGCTACGGC
CATATCGGTA TGCAGTTGGG TATTTTGGCT GAAAGCCTGG GTATGCACGT TTACTTCTAT
GACATCGAAA GTAAATTACC GTTGGGCAAT GCCCAACAAG TGCGCCATTT GTCCGACCTG
CTGAATATGA GCGATGTGGT GAGCCTGCAT GTGCCAGAGA ATGAAAGTAC GCACAATATG
ATGGGCGCGG AAGAACTGGC ATTGATGAAA CCAGGTGCAA TCCTGATTAA CGCCGCTCGC
GGTACGGTGG TTGATATTCC CGCGCTGTGT GAAGTGCTAA GCAGCAAGCA TCTGTCCGGT
GCGGCGATTG ACGTGTTCCC ACAGGAGCCG GCAACTAACA GCGATCCATT CCTGTCGCCG
CTGTGTGAGT TTGACAACGT GTTGCTGACG CCGCATATCG GTGGTTCCAC GCAGGAAGCG
CAGGAAAATA TCGGTGATGA AGTCGCTGGA AAACTGGCGA AATATTCAGA TAACGGTTCT
ACGCTGTCTG CGGTGAATTT CCCTGAAGTG TCGCTGCCTG TTCACGGTGC TCGCGCCAGT
CGCCTGTTGC ACATTCATGA AAACCGTCCT GGTGTGATTA CTAAAATTAA CCAGATCTTT
GCTGAGCAGG GTATTAACAT TGCCGCACAG TATCTGCAAA CGACGCCTGA AATTGGCTAT
GTGGTGATCG ACGTTGAAAC TGACGGTGCG CAAACGGCAC TGCAACTGAT GAAAGCGATC
CCTGGCACCA TTCGTGCGCG TCTGCTGTTC TAA
|
|---|
| Protein sequence | MAKVSLEKDK IKFLLVEGVH QSALDNLRAA GYTNIEFHKG ALDPEALKAS IRDAHFVGIR
SRTHLTEEIF AAAEKLIAVG CFCIGTNQVE LSAATKRGIP VFNAPFSNTR SVAEMVIGEM
LLMLRGIPSA NAKAHRGIWH KLAVGSFEAR GKKLGIIGYG HIGMQLGILA ESLGMHVYFY
DIESKLPLGN AQQVRHLSDL LNMSDVVSLH VPENESTHNM MGAEELALMK PGAILINAAR
GTVVDIPALC EVLSSKHLSG AAIDVFPQEP ATNSDPFLSP LCEFDNVLLT PHIGGSTQEA
QENIGDEVAG KLAKYSDNGS TLSAVNFPEV SLPVHGARAS RLLHIHENRP GVITKINQIF
AEQGINIAAQ YLQTTPEIGY VVIDVETDGA QTALQLMKAI PGTIRARLLF
|
|---|
| |