| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3867 |
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| Symbol | |
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| ID | 8532293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 4271329 |
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| End bp | 4272216 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003261207 |
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| Protein GI | 261823101 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000535009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAG CCGGTATCAT ACGTGACCTA CTTAGCTGGC TGGAAAGCCA TCTCGACCAA
CCATTATCAC TCGATAATGT GGCAGCGAAA GCAGGTTATT CCAAGTGGCA TCTGCAAAGA
ATGTTCAAAG ACGTAACGGG CAACGCCATT GGTTCCTATA TCCGAGCGCG GAGATTGACC
AAAGCGGCGG TTGCACTTTG TCTGACCAGT CGCCCTATCC TTGATATTGC CCTGCAATAC
CGTTTTGATT CACAACAAAC TTTTACTCGC GCGTTCAAAA AGCAGTTTGC CCAAACGCCA
GCCTCTTATC GCCGCGCCGA TAACTGGAAT ACCTTCGGCA TTCGGCCGCC AATCCGGCTT
GGTGAATTTA CCCTACCACA ACCGCAATTT GTAGAACTGC CAGAAACGCA ACTTCTTGGG
CTAACGCAAA CCTATAATTG CCGGCTTGAG CAGATCTGTA ACTTCCGTTC AGAAATTCGC
ATCCACTACT GGCGTCAATT CTTAGGTGAA ACCTGTTCCA TTCCCCCCGT GCTTTACGGG
CTGCACCATT CACGGCCAAG TAAAGAGAAA GACGACGAAC ACGAGGTGCT CTACACCACC
GCATTAGAGC CGCAGTATCT GCCTGATGAT GTGCATTCCG GTGAGCCACT CACGCTACCG
GGCGGCGACT ACGCGATGTT TGTTTTTGAA GGGCCGAAAG ATGAGCTACA GGACTTTATT
ATCACGCTGT ATGACACCTG TCTGCCGACC TTCCAGCTCA CGCGCCGTAA AGGGTTCGAT
GCCGAACGCT TCCATCCAGA CGGCACGGCG AGTGATGAGA TCCCTGACAT CATCCGCTGC
GAGTATCTCA TCCCCATCCA GCGCGCAGAA CCAACCTCAG CGCTGTAA
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| Protein sequence | MDQAGIIRDL LSWLESHLDQ PLSLDNVAAK AGYSKWHLQR MFKDVTGNAI GSYIRARRLT
KAAVALCLTS RPILDIALQY RFDSQQTFTR AFKKQFAQTP ASYRRADNWN TFGIRPPIRL
GEFTLPQPQF VELPETQLLG LTQTYNCRLE QICNFRSEIR IHYWRQFLGE TCSIPPVLYG
LHHSRPSKEK DDEHEVLYTT ALEPQYLPDD VHSGEPLTLP GGDYAMFVFE GPKDELQDFI
ITLYDTCLPT FQLTRRKGFD AERFHPDGTA SDEIPDIIRC EYLIPIQRAE PTSAL
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